Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1335 ATGATGCACATGACCTTTTACTGGAGCCGGAAGGTGAATCTCTTGATCGATTCCTGGCAGACCCAGGATTGGACCGATTATCTTCTCACCCTTCTTGCGTGCCTCATAGTTTCCGCTTTCTACCAGTTCATTGAGAATCGCAGAATTCGCCTCAAGCTCATCGGTGCCGGAAAGCCCTTCCCGTCGGAGATTCAGACCCCTCTGTTGCAGCGGAAGCTCACCGGAAACAGGGCCAAGTTGGGGGTGAAGGTCGCGGGGGCGATTCTCTTTGGGCTGAGCTCGGCCATAGGGTATTTATTGATGTTATCGGTTATGTCCTTCAACGGAGGGGTCTTTGTGGCCATCGTGGTGGGTCTCGTTGTTGGGTACTTTTTCTTCAGGAACGAGGGTGAAGATTCCATTACAGTAGACACTTCTTGCGCCTGTGCTTGA 432 0.5208 MMHMTFYWSRKVNLLIDSWQTQDWTDYLLTLLACLIVSAFYQFIENRRIRLKLIGAGKPFPSEIQTPLLQRKLTGNRAKLGVKVAGAILFGLSSAIGYLLMLSVMSFNGGVFVAIVVGLVVGYFFFRNEGEDSITVDTSCACA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1335 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vra5g1335 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vra5g1335 143 PANTHER COPPER TRANSPORTER 5.1-LIKE 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1335 Vra-Chr5 20261071 20261809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1335 1 143 Inorganic Solute Cotransporters AT5G20650 49.669 2.32e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1335 K14686 - gmx:100805457 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1335 5 20261071 20261809 Vra5g1335 5 20261071 20261809 ECH
Vra7g2631 7 46560439 46562311 Vra5g1335 5 20261071 20261809 ECH
Vra9g0338 9 2794751 2796399 Vra5g1335 5 20261071 20261809 ECH