Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1218 ATGTTTGCAGAAGAGAATGGCCTCAAGGGAGACCCCAGACTTCAAGCCATTTCTCAAGCCATCAGAGTCGTTCCTCACTTCCCCAAGCATGGAATAATGTTCCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCAAGGGGATTCATGTTTGGTCCTTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTCCCCTTACGCAAACCACGGAAGCTGCCAGGTGAAGTGATTTCAGAAAAATATGCTCTAGAATATGGGACAGATTGTTTGGAGTTGCATGTTGGTGCTGTCCAGCCGGGTGAAAGGGCCATAGTAATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGTGCTCAAGTAGTGGAATGTGCTTGTGTCATTGGTGTGCCTGATGTCAAGGGGCAGTGCAGGCTCATTGGAAAGCCACTTTATGTTCTTGTTGAGCCGCGTAAAGCAGATAAATGTTATTAA 576 0.4653 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGVKLLERVGAQVVECACVIGVPDVKGQCRLIGKPLYVLVEPRKADKCY* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1218 191 Gene3D - 6 184 IPR029057 -
Vra5g1218 191 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vra5g1218 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 188 - -
Vra5g1218 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 188 - -
Vra5g1218 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vra5g1218 191 CDD PRTases_typeI 51 183 IPR000836 -
Vra5g1218 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
Vra5g1218 191 SUPERFAMILY PRTase-like 20 176 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1218 Vra-Chr5 18561871 18565487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1218 11 183 PRT Gene Family AT1G27450 69.942 5.33e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1218 K00759 - gmx:100499904 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1218 5 18561871 18565487 Vra5g1218 5 18561871 18565487 ECH
Vra5g1218 5 18561871 18565487 Vra6g1584 6 31273727 31276521 ECH
Vra6g1584 6 31273727 31276521 Vra5g1218 5 18561871 18565487 PCT