Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1208 ATGAGATTAGGTGTGAATAAGCACGTTGTGCGGTGCTCGATCGGCACCGTTTCAGGCGAGTCCAAAACCCATTTTCCCGCCAAATCCCAACGTTCGTCTTTCTCAGCTGTCAAGTTCCGCCCTGGCGATGGTTCTTCAGGTTGTCTCCCAGCCAACGCCTTGCAGGCAGGTGCAAAAGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTGTTGTCTAAGGGAAAGGCAGCTGGGGTGCTTCGATTGGTTTTCCACGATGCTGGAACCTTTGACATCAATGACAATTCAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCCGAAAATGCCGGCCTGACAAAATCAGTAAAGGTACTGCAAAAAGCAAAGACTCAGATAGATGCCATCCAACCAGTATCTTGGGCGGACATGATTGCTGTGGCCGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCACCTATCCAAGTTTCACTGGGCAGACTAGATGCACTGGTGCCTGATCCAGAAGGGCGACTCCCCGAGGAATCTCTTAATGCTTCTGGTTTGAAGATGTGTTTCCAGAGCAAAGGCTTATCAACACAAGAACTCGTGGCATTATCCGGAGCCCATACTATTGGAAGCAAAGGTTTTGGAAGCCCAAATTCTTTTGATAATTCATATTATAAGGTCCTTTTGGAAAAGCCATGGACATCTTCGGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCACGCCCTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAATACGCCGACAGTGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTTAGGTGGAAAAACATGTAA 879 0.4585 MRLGVNKHVVRCSIGTVSGESKTHFPAKSQRSSFSAVKFRPGDGSSGCLPANALQAGAKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDINDNSGGMNGSIVYELERPENAGLTKSVKVLQKAKTQIDAIQPVSWADMIAVAGAEAVEVCGGPPIQVSLGRLDALVPDPEGRLPEESLNASGLKMCFQSKGLSTQELVALSGAHTIGSKGFGSPNSFDNSYYKVLLEKPWTSSGGMSSMIGLPSDHALVEDDECLRWIKKYADSENLFFEDFKNAYVKLVNSGVRWKNM* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1208 292 Gene3D Peroxidase, domain 2 177 279 - -
Vra5g1208 292 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 49 290 IPR044831 GO:0004601|GO:0034599
Vra5g1208 292 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Vra5g1208 292 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Vra5g1208 292 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 49 290 - -
Vra5g1208 292 Pfam Peroxidase 66 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Plant ascorbate peroxidase signature 77 92 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Plant ascorbate peroxidase signature 95 105 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Plant ascorbate peroxidase signature 135 153 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Plant ascorbate peroxidase signature 154 166 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Plant ascorbate peroxidase signature 175 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Plant ascorbate peroxidase signature 193 214 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Plant ascorbate peroxidase signature 263 287 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 ProSiteProfiles Plant heme peroxidase family profile. 77 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g1208 292 Gene3D - 65 286 - -
Vra5g1208 292 SUPERFAMILY Heme-dependent peroxidases 74 291 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1208 Vra-Chr5 18482652 18487067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1208 77 282 Peroxidase AT4G16270 31.439 1.77e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1208 K00434 - gmx:100792735 490.73