Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1184 ATGATGCACATGACCTTTTACTGGAGCCGGAAGGTGAATCTCCTGATCGATTCTTGGCAGACCCAAGATTGGACAGATTATCTTCTCACCCTTCTTGCATGCCTCATTGTTTCAGTTTTCTATCAGTTCATTGAGAATCGCAGAATTCGCCTCAAGCTCATCGACGCCGGAAAGCCCTTCCCGTCAGAGATCCAGACCCCTCTGTTGCAGCGGAAGCTCACCGGAAACAGGGCCATGTTGGGCGTGAAGGTCGCCGGGGCGATTCTCTTTGGGTTGAGCTCGGCCATAGGGTATTTGTTGATGTTATCGGTTATGTCCTTCAATGGAGGAATATTTGTGGCCATCATCGTGGGTCTCGCTGTTGGTTACTTTTTCTTCAGGAGGGTGAAGATTCCATTTTAG 402 0.4925 MMHMTFYWSRKVNLLIDSWQTQDWTDYLLTLLACLIVSVFYQFIENRRIRLKLIDAGKPFPSEIQTPLLQRKLTGNRAMLGVKVAGAILFGLSSAIGYLLMLSVMSFNGGIFVAIIVGLAVGYFFFRRVKIPF* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1184 133 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vra5g1184 133 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 128 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vra5g1184 133 PANTHER COPPER TRANSPORTER 5.1-LIKE 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1184 Vra-Chr5 18250787 18251506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1184 1 127 Inorganic Solute Cotransporters AT5G20650 48.872 2.13e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1184 K14686 - gmx:100805457 228.024