Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1180 ATGCCACAATATATGTTTTTGGGGTTGTGTATTATTGACATTTTTGGTGGTGGATTTGAGGTTTCAAATTCAATCATTATGAGGTGTTTTCAATTGTTTTTTTGGTTTTCGCGTTCGGCATTCCGGTTGTTCAGTGTGTTTGACGCCCGACAAGATACATTTTGCACTTATGGTGGTATTCAAAAGATGTCTTCAGTAATATCATCATCCTCGTCTCGTGTTTTTGATGCCATCAATGAATGTGTGTTCCTGCTTCAATCAGACTCAGTTGAAGTTCAAGAGAGAGCTCTTCAAATGCTGGCTTCCATCACCAAGGTCAGTTCTCAAAACAGAACCTCACTGGCTCAAACAGAAGGAGCCATTCCAACAATAGCCACACTAACAAACTCTTCCTACCCGATCATCCAAACACTGTCTTTGTTAACCCTCTTCAACCTATCCCTCAACCCAGATCTGAAGCAATCTCTTGCTGACATGGAAACCATTTACTACCTCAACTCCCTCATCACCAACTCATCATTTAACCTTGACTCTTCCAAACTGGCCTCCTCATTGGTTTGCAGCTTGGCCATGCATGACAAAAACAAGGCCAAATTTGGGGTGGCAGGCACAGTTCAGTTGCTAGTTAAAGCAGTTGAAGGGTCTCACGGTTCTGATGCGCACCAGCTTCTGAGTTCTCTTGCTGAGCTTGTTCATTTTCATGGAAACTGCACTCTGGCAGTGCGAGCCGGGGCAGTGGCAGTGCTGCTTAAGGTGGTGAAGGGTACTGATAACGAGGACTTGGCAGGAACTTCTCTCGCTGTTCTTAGTCTCCTTGCGAGGTTTGATGAAGGGTTGAATTGTTTGAAGGAAACGGATGAGATAATTAGAGTAATGTTGAATGTGTTGAAGGGTAGGTCTCTGTTGAGCAAGGAGGGTGCTGCTGATATCCTTATTCGTCTTTTTGATGACAGTGAAGATTGTGTGACTGAGGCTTTGATGTTGCCAGAATTTTCAACCGTCTTGGCTGATCTTTGTGTGAGGGGTTCGGTCAGAGTTCGTGACAAGGCGGATTTGTTGATGAAGAAGATGGCACTGGTGAGCTTGGACTCTGATATGGAAGTATGCTCCCTGCATGGTTAA 1122 0.4447 MPQYMFLGLCIIDIFGGGFEVSNSIIMRCFQLFFWFSRSAFRLFSVFDARQDTFCTYGGIQKMSSVISSSSSRVFDAINECVFLLQSDSVEVQERALQMLASITKVSSQNRTSLAQTEGAIPTIATLTNSSYPIIQTLSLLTLFNLSLNPDLKQSLADMETIYYLNSLITNSSFNLDSSKLASSLVCSLAMHDKNKAKFGVAGTVQLLVKAVEGSHGSDAHQLLSSLAELVHFHGNCTLAVRAGAVAVLLKVVKGTDNEDLAGTSLAVLSLLARFDEGLNCLKETDEIIRVMLNVLKGRSLLSKEGAADILIRLFDDSEDCVTEALMLPEFSTVLADLCVRGSVRVRDKADLLMKKMALVSLDSDMEVCSLHG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1180 373 Gene3D - 196 361 IPR011989 -
Vra5g1180 373 Gene3D - 42 195 IPR011989 -
Vra5g1180 373 SUPERFAMILY ARM repeat 75 358 IPR016024 -
Vra5g1180 373 PANTHER U BOX DOMAIN-CONTAINING 63 365 - -
Vra5g1180 373 PANTHER KINESIN-ASSOCIATED PROTEIN 63 365 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1180 54 350 U-box Gene Family AT1G23030 24.752 1.18e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1180 - - vra:106761892 627.091