Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g1098 | ATGGCGCATATGGTAGAGTACTTCTGTCTTCTCATGCTCTTCACTTGTTTTTTGCCTTCACTCGCTGACAATGCTCAAGTTCTGATGAACTTCAAAACATTCTTGTCCAATGCTCATGCTTTAAGCAACTGGGGGAACCAATCAATCGGTGTGTGCAGCTGGACTGGTGTACTGTGTTTCAATCAGAGTTTTCATGGCTTGAGATTAGAACACATGGGACTGGGTGGCACTGTTGACGTAGACACGCTGCATCTGTTGTCCAATTTGAACAGCTTTAGTGTCATTAACAACAACTTCGAGGGTCCAATGCCCGAATTCAAGAAGCTTGTCAATTTAAGGGCGTTGTTTCTGAGCAATAACAAGTTCTCTGGTGAAATCCCAGATGATGCTTTTGATGGCATGAAACGTCTCAAGAGAGTATTCTTGGCTGAAAATGAGTTCACTGGTCATATTCCTACGTCCTTGGCTCAATTGCCTAAACTTTTTGATGTGGACATACATGGAAATAGTTTTGAAGGAAACATACCAGAATTTCAACAGACCGATTTCAGAGTGTTTAATCTGTCTTACAACAACTTAGAGGGTCGAATACCAGAAAGCCTAAGCAGCAAGGATCCAACTTCATTTGCTGGTAATCAAGGTCTATGTGGAGATCCTCTAGGCCCCTGCATTGAAAGCCCCACCACACCATCGGACACTGATCAACCACCAAATTCACATACAGAAAAAGAAAACAAGAAAAAACGCATTATTCTAACAGTTGTTGTAGTGGTGGGGGTGATTGTGCTGGCTTTAATAATAGCACTCTTAATCATACGTTACCGTCGAAAGAAACCCGTGCTGGTCAAAGATGCACAACCCCAGAACGTTACTCCATTTTCTAGCGAGTCCAAATCCATTGTTGTGACAGCTGAATCCAAGAAAAGTGAAGACGGAGGGTTGAACTTTGTCGGGAACCAGAGAGGGGGGATTGACTTGCAAGACCTTCTAAGGGCCTCGGCAGAGGTTCTGGGGAGTGGTAGCTTTGGATCCACTTACAAGGCCATGCTTCTGAACGGGCCAGTGGTGGTGGTGAAGAGATTCAAGCACATGAACGACGTGGGGAAGAAAGAGTTTTTTGACCACATGAACAGGCTCGGAAAATTGTCACATCCCAATCTACTCCCTCTCGTTGCATTCTACTACGGAAAAGAAGAGAAGCTTTTGGTTCATGACTTTGCTGAAAATGGCAGCTTGGCCAGTCATCTTCACGGAAGAAGCGGTGTTGAGTTGAACTGGGCAACTCGTTTGAAGATCATAAAAGGAGTGGCGAGGGGATTGGCTTATCTGTACACGGAGTTCCCCGACCAAGCATTACCGCACGGTCATCTGAAATCATCAAACGTTGTACTAGACAGTTCCTTCGAGGCTCGTTTGGCAGAGTACGGACTGGTGGCGGTGGTGGAGAAGAGCCACGCTCAGCAGTTCATGGTGGCTTACAAGTCTCCAGAGGCGAGCCAGTCTGAGAAGCCAAGCGAGAAGAGCGATGTGTGGTGTCTGGGGATTCTGATACTGGAGCTTTTGACGGGGAAGTTCCCTGCGAGTTATCTGAGGCATGGGAAGGGAGCGAGTGAGGATTTGGCGGCGTGGGTGAACTCCATAGTGAGCGAAGGGTGGAATGGGGAGATGCTTGATAAGGAGATTCCTGGGAGAGGGAGTGGAGAGGGTGAGATGGTGAAGCTGTTAAGGATTGGAATGGGATGCTGTGAATGGAGCTTGGAGAGTAGGTGGAGTTGGAAGGAAGCTGTGGCTAAGATTGAGGAGTTGAAGGAGAGTGACGATGGTGATGACGGTGGAAGTGAACGGAATCATCTCTACTCGGTTTCTACCAGTCTCGACGACTTCTCTCTCTCACAGTCTATTTCATGA | 1908 | 0.4701 | MAHMVEYFCLLMLFTCFLPSLADNAQVLMNFKTFLSNAHALSNWGNQSIGVCSWTGVLCFNQSFHGLRLEHMGLGGTVDVDTLHLLSNLNSFSVINNNFEGPMPEFKKLVNLRALFLSNNKFSGEIPDDAFDGMKRLKRVFLAENEFTGHIPTSLAQLPKLFDVDIHGNSFEGNIPEFQQTDFRVFNLSYNNLEGRIPESLSSKDPTSFAGNQGLCGDPLGPCIESPTTPSDTDQPPNSHTEKENKKKRIILTVVVVVGVIVLALIIALLIIRYRRKKPVLVKDAQPQNVTPFSSESKSIVVTAESKKSEDGGLNFVGNQRGGIDLQDLLRASAEVLGSGSFGSTYKAMLLNGPVVVVKRFKHMNDVGKKEFFDHMNRLGKLSHPNLLPLVAFYYGKEEKLLVHDFAENGSLASHLHGRSGVELNWATRLKIIKGVARGLAYLYTEFPDQALPHGHLKSSNVVLDSSFEARLAEYGLVAVVEKSHAQQFMVAYKSPEASQSEKPSEKSDVWCLGILILELLTGKFPASYLRHGKGASEDLAAWVNSIVSEGWNGEMLDKEIPGRGSGEGEMVKLLRIGMGCCEWSLESRWSWKEAVAKIEELKESDDGDDGGSERNHLYSVSTSLDDFSLSQSIS* | 636 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g1098 | 635 | Pfam | Leucine rich repeat | 111 | 170 | IPR001611 | GO:0005515 | |
Vra5g1098 | 635 | ProSiteProfiles | Protein kinase domain profile. | 331 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1098 | 635 | Pfam | Protein kinase domain | 334 | 596 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1098 | 635 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 406 | - | - | |
Vra5g1098 | 635 | Gene3D | Ribonuclease Inhibitor | 182 | 227 | IPR032675 | - | |
Vra5g1098 | 635 | Gene3D | Transferase(Phosphotransferase) domain 1 | 407 | 620 | - | - | |
Vra5g1098 | 635 | Gene3D | Ribonuclease Inhibitor | 23 | 181 | IPR032675 | - | |
Vra5g1098 | 635 | ProSitePatterns | Protein kinases ATP-binding region signature. | 337 | 359 | IPR017441 | GO:0005524 | |
Vra5g1098 | 635 | Pfam | Leucine rich repeat N-terminal domain | 23 | 59 | IPR013210 | - | |
Vra5g1098 | 635 | SUPERFAMILY | L domain-like | 25 | 204 | - | - | |
Vra5g1098 | 635 | MobiDBLite | consensus disorder prediction | 220 | 244 | - | - | |
Vra5g1098 | 635 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 4 | 611 | - | - | |
Vra5g1098 | 635 | SUPERFAMILY | Protein kinase-like (PK-like) | 335 | 601 | IPR011009 | - | |
Vra5g1098 | 635 | PANTHER | LRR RECEPTOR-LIKE KINASE | 4 | 611 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g1098 | Vra-Chr5 | 17454110 | 17456956 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g1098 | 4 | 610 | Receptor kinase-like Gene Family | AT5G35390 | 45.095 | 5.85e-180 | 524 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vra5g1098 | Pkinase | 5.1e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g1098 | - | - | gmx:100803999 | 958.747 |