Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1091 ATGTCCATGGATCCTACCAAGAAACCTAACAAGATCAGAGACATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAGGGCAGCAAACTCTTCAAAAACAAGTAGAAGTAATAGTAACAACACCAACAACAGCACCGGCAGAAGCATCAAATTTCTCAAAAGAACACTTTCTATTTCGGAGGGAGGAGGATCGAGCAGTGTTGTTCCCAAGGGCTACGTTGCTGTTTGTGTTGGCGTTGACCTTAGCAGGTTCGTTATACCAACCGAGTATTTGGGTCACCAAGCTTTTCACATGTTACTCAGAGAAGCTGAGGAAGAGTTTGGGTTTGAACAAACTGGGGTTCTCAGAATCCCTTGTGAAGTGTCTGTGTTCGAGAGTATCTTGAAGATAGTAGAGAGAAAGGACAAGTTTTTCACTCAGAAATGCAGGTTTAGCATTGAGAAAATGATGGGATATTGTTCCTCCAACAACCTTGCTTATTCTCATCACCCTCAAAGTCCAATGTGCAGATAG 516 0.4244 MSMDPTKKPNKIRDIVRLQQILKKWRRAANSSKTSRSNSNNTNNSTGRSIKFLKRTLSISEGGGSSSVVPKGYVAVCVGVDLSRFVIPTEYLGHQAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDKFFTQKCRFSIEKMMGYCSSNNLAYSHHPQSPMCR* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1091 171 Pfam Auxin responsive protein 23 131 IPR003676 GO:0009733
Vra5g1091 171 MobiDBLite consensus disorder prediction 26 47 - -
Vra5g1091 171 PANTHER OSJNBA0060N03.10 PROTEIN 8 171 - -
Vra5g1091 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 171 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1091 Vra-Chr5 17416639 17417557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1091 6 171 Calmodulin-binding Proteins AT4G31320 52.332 9.56e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1091 K14488 - gmx:100527662 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1091 5 17416639 17417557 Vra5g1091 5 17416639 17417557 ECH