Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1049 ATGAAAACCCACCAGCAACCAAAGCTAAAAACCCAACTTTTCTCTTGTGGCTTCTTCCGCCACTGCGCCCAAACCGTTCTAAGCCCCACCGGCGCCACCCCACCTCTTCCTCACACTCCCCCAACCTTCCAATGCGAATCCTCCACCTCCTCCTCTTCCTCCACCACTTCCCAAAGCTTCACGCAGTGGAGATTCTCTCCCCCAACACCCACTCCCAACACCACCACCGCCACCACCACCACCAATAACACCAACAACCTCATCAAAACAAACACAAACACAAGCTTTAATGTTCCTCTTCCTCCTCCACCGCCACTGCCACCACAAATCCACAACCTCCAAGAACTCTTCCACATTTCAGAACTCCAACTAACAACAGACCCAGCTTCTGCCCTTCAACTTCTAGAACGTTCTCTTGTTCCCAACCCACCTCAAGACCAACCCCCTTGCCCTCCAAACCTCATGCACGCTCTCACGCGCAACCTCGCGCTCGCCAAACCCGCCACCAAGATCCTCTTCGCGCTCTGCCTCTCCGATGTCAACCGCCGTGTCGCCGTCGAGACCGGCGCCGTCTCCGCCGTCATCGAGGCCGCCCTCGAACTCGACGGCGCCCCCTCCGAGCGTGCCCTCGCCGCCCTCGAGCTCATGTGCACGCTGCCCGATGGCGCTCACGAAGTCCGCGCCCACGCCCTCGCCGTCCCCGTCATGGTTACCATGATGGGAAAGACCGCTGCCCGCGCCAAAGAATACGCCATTGGAGTCCTGGCCGTCGTGTACGGTGGCTCCACATCCGACCACCACACCGCTCCCCCAGAGGAGGTGGCGCGTGCGGTGGAACTCGCGCTCCAGGGCGAGTGCAGCGCTCGGGCCAGGAGGAAAGGTGCCCAGCTGTTGAAAACTTTGAAACAACTCTCCGAAGCGGAGCCTCTCCCTCTGGACAACAATTGA 948 0.597 MKTHQQPKLKTQLFSCGFFRHCAQTVLSPTGATPPLPHTPPTFQCESSTSSSSSTTSQSFTQWRFSPPTPTPNTTTATTTTNNTNNLIKTNTNTSFNVPLPPPPPLPPQIHNLQELFHISELQLTTDPASALQLLERSLVPNPPQDQPPCPPNLMHALTRNLALAKPATKILFALCLSDVNRRVAVETGAVSAVIEAALELDGAPSERALAALELMCTLPDGAHEVRAHALAVPVMVTMMGKTAARAKEYAIGVLAVVYGGSTSDHHTAPPEEVARAVELALQGECSARARRKGAQLLKTLKQLSEAEPLPLDNN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1049 315 MobiDBLite consensus disorder prediction 32 88 - -
Vra5g1049 315 MobiDBLite consensus disorder prediction 42 88 - -
Vra5g1049 315 Gene3D - 129 309 IPR011989 -
Vra5g1049 315 SUPERFAMILY ARM repeat 140 261 IPR016024 -
Vra5g1049 315 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 308 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1049 166 303 U-box Gene Family AT1G49780 35.971 3.40e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1049 - - gmx:100814020 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1049 5 16871086 16872594 Vra5g1049 5 16871086 16872594 ECH