Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0945 ATGTTAGGTGATTGTTCTGATAAAATGGGAGAAGATTGTGGAACCTGGATACCAAATCTGCAATTAGGATGGCAATCACCAAATTTGAATCCCCTTGATGTAGGGAAGCTAGGTGGTATTTCTGCAGCCATGAACCCAGCGGTGAATATGGTTTCTGCATATGAGACAATACCAGCTTATGCATCCTCTGCACTACAACCTCGTTTGCAGTTAGGATGTTCCAGTGATCCGCGTGGTTGGTTTTATTGTCTGCCTCGCTTTCGACAAGAATTTTCCCCTGCTCCGAACTTCACTGTTGAAGGAAAAACCCCTGTTGACCATGTGAGAGGTTTTGAGGACAAAAATGCTCCATTTGGCGAGTCTACCTCACCACGAAAACAATTTCTCGTCATTGACCAGACTGCTGGTCAAACAACTGTTGTTTATAGTTCTAGGTTTGGAAGTCCTTGTGAGTGCCTTGCTTCTTGGCATTCAAAACTACGTGGTGGTAACAATTGGAGGGGGGATGAACCTTGTTTTAGAAGAGATTTGAATTTGAATCGTATGAATGAGCCAACTTTGGCTGACAAGGTGCATGAGAATCATGAAACTAGCATTGAAAGCGAGATGCATGAAGACACAGAAGAAATTAATGCATTGCTTTACTCGGACAGTGATGACTATTCTGCCCAGGATGATGATGATGATGATGATGATGATGAAGTTACAAGCACTGGGCACTCTCCTAGTACAATGACCACTCATGATGACTGCAAGACCTCTAGGGATGAAACTGTGAATGAAGTTGCAAGCTCTGCAAAGAAAACCAAGAAGAGGAAGTTATTGGATGATTGTTATGACGACATACAACTCACTGATACTGCCAGTTCTCAGAATATGAACAAATCTTCAGCCACATGTGATGACTCAGAATCAAGATGTTCGAGTACCAAAAACGGTGGATCTTTGTCTAGCAACAAGAAGATGAAAAAGGAGAAGATTCAAGATGTCCTCAGCATTCTGAAGAGCATAATTCCTGGAGGGAAAGATAAACGCCCGGTTATGCTCCTTGATGATGCAATACGCAGCTTGAAATCATTGAAACAGAAGGCTCAGGCACTCGGACTTGATGCCTTGTAA 1119 0.4272 MLGDCSDKMGEDCGTWIPNLQLGWQSPNLNPLDVGKLGGISAAMNPAVNMVSAYETIPAYASSALQPRLQLGCSSDPRGWFYCLPRFRQEFSPAPNFTVEGKTPVDHVRGFEDKNAPFGESTSPRKQFLVIDQTAGQTTVVYSSRFGSPCECLASWHSKLRGGNNWRGDEPCFRRDLNLNRMNEPTLADKVHENHETSIESEMHEDTEEINALLYSDSDDYSAQDDDDDDDDDEVTSTGHSPSTMTTHDDCKTSRDETVNEVASSAKKTKKRKLLDDCYDDIQLTDTASSQNMNKSSATCDDSESRCSSTKNGGSLSSNKKMKKEKIQDVLSILKSIIPGGKDKRPVMLLDDAIRSLKSLKQKAQALGLDAL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0945 372 PANTHER TRANSCRIPTION FACTOR BHLH145 9 370 - -
Vra5g0945 372 MobiDBLite consensus disorder prediction 219 267 - -
Vra5g0945 372 PANTHER TRANSCRIPTION FACTOR BHLH145 9 370 IPR037546 -
Vra5g0945 372 MobiDBLite consensus disorder prediction 290 317 - -
Vra5g0945 372 MobiDBLite consensus disorder prediction 220 235 - -
Vra5g0945 372 MobiDBLite consensus disorder prediction 249 267 - -
Vra5g0945 372 Coils Coil 350 370 - -
Vra5g0945 372 MobiDBLite consensus disorder prediction 290 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0945 Vra-Chr5 15748041 15751281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0945 116 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 37.349 5.20e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0945 - - gmx:102668102 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0945 5 15748041 15751281 Vra5g0945 5 15748041 15751281 ECH
Vra6g1271 6 23589324 23593118 Vra5g0945 5 15748041 15751281 PCT