Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g0943 | ATGGGTTACTTCTCTTGTAATGCCCAATCCGCAATCGCCACCTGCGACCCTCACTTCAAGAAGCACAAACCCCTCCCTGCCAAACCAATACGCCACTTCAACTACGCCGAAATCTCCGCCGCAGCTTCTGCCTTCTCCGCCGATACCTTTCTCGGCAAAGGCAGCCATGGCAGAGTCTACAAAGCTACCCTCGACGGCGGAAAGCTCCTTGCCGCCGTCAAAACAACTAAACTGGTCTCTGCTTCCAAGAACCACTCCACTAAATGCACCGGCTGCGGCAACTGCACCAGTCCCGTGGAGAACGAGATCGAGATCCTCTCTCAAGTTCCGAGCCCCCGCGTGGTGAACCTCATCGGCTTCAGCACCGACCCAGACGGTAACAAATTAATCGTAGTTGAATACATGCCCAACGGTTCGCTCCACGATCTATTACATTCCGTTAGAAAACCGCCCGGTTGGAACCGGAGGATCCGGTTCGCGGTTCAGGTTGCGAAAGCGGTTCGCGAATTGCACTCTGCCAACCCTCCGGTTATTCACCGCGACGTTAAGTCTTCCAATGTTTTAATTGACGAGAGATGGAACGCGAGGCTCGGTGACTTCGGCCTTGCGTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACGCCGCCGGCGGGAACGTTAGGGTACCTCGACCCGTGCTATCTGGCGCCGGAGGATCTCAGCGCCAAGAGCGACGTCTTCAGCTTCGGGATCTTACTGCTGGAGATCATCAGCGGCCGGAACGCCATCGACGTCAATTACAGCCCTCCCTCTATTGTGGACTGGGCGGTGCCGCTGATCAAGCTCGGCGACTTCGCCGGAATCTGCGACCGCCGGATCGGAACACCGACGGACCCCGCCGTGGTGCGGCAGCTGGCGGTGCTTGCTGCCAGATGCGTGAGGTCGAAGGCCGAGAAGCGGCCGTCCATGACGGAGGTTGTGGAGTGTCTGAATCTGGCAAGGAAGAGGATTCGCGCGTCCCCGGTGTGGATGTCTCTGCGGCGGCGCGTGGCGCGTATGGAGAGCGCGGTGCCGGTGGTGGCGTGGGAGGAGTGTGATGATAATAGTATTAATGATTGTGATAGGAGTGAGAAATTTGTGAGCATGGTGAAAGGTGGGAGTGGGAGCAGGAGGAAGGGGAAAGTATCCAGTGTGTGGGGTGTAGGGTATGGGAGTGAAGCGTCCAATAATAATAAAGTGATAAGGTCAAAGTCCATTGGTTCGGTGAGAGGGAGCTGGGTTAAAATGCAGGCACAGCAAAGCGAGGAGCAGGGATTTGGGAGGAGGAAGGTGAGGTTAAAAAAGTCAAAATCTTTGGGGGTTTTGCAAGGTTCTGTACTTTCACATTACAGTGAGAATAATAACAGTTATTATAGTTATAATAAGAAGAAGAAGAACAAGAATAATAATGATGATGATGATGATGATGATGTATCAGTAGTAATTGGGTCTGCAATGGCAAAGTTGGTTGTTACAGAAAAGTCAGAAAAGAAAATGGTGGAAAAGCCGTTAGTGAAATTGCATGATGAGAGTGGGAGTATGATTTGA | 1572 | 0.5305 | MGYFSCNAQSAIATCDPHFKKHKPLPAKPIRHFNYAEISAAASAFSADTFLGKGSHGRVYKATLDGGKLLAAVKTTKLVSASKNHSTKCTGCGNCTSPVENEIEILSQVPSPRVVNLIGFSTDPDGNKLIVVEYMPNGSLHDLLHSVRKPPGWNRRIRFAVQVAKAVRELHSANPPVIHRDVKSSNVLIDERWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSIVDWAVPLIKLGDFAGICDRRIGTPTDPAVVRQLAVLAARCVRSKAEKRPSMTEVVECLNLARKRIRASPVWMSLRRRVARMESAVPVVAWEECDDNSINDCDRSEKFVSMVKGGSGSRRKGKVSSVWGVGYGSEASNNNKVIRSKSIGSVRGSWVKMQAQQSEEQGFGRRKVRLKKSKSLGVLQGSVLSHYSENNNSYYSYNKKKKNKNNNDDDDDDDVSVVIGSAMAKLVVTEKSEKKMVEKPLVKLHDESGSMI* | 524 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g0943 | 523 | Gene3D | Transferase(Phosphotransferase) domain 1 | 135 | 338 | - | - | |
Vra5g0943 | 523 | SMART | serkin_6 | 45 | 325 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g0943 | 523 | Gene3D | Phosphorylase Kinase; domain 1 | 30 | 134 | - | - | |
Vra5g0943 | 523 | ProSiteProfiles | Protein kinase domain profile. | 45 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g0943 | 523 | MobiDBLite | consensus disorder prediction | 466 | 485 | - | - | |
Vra5g0943 | 523 | ProSitePatterns | Protein kinases ATP-binding region signature. | 51 | 74 | IPR017441 | GO:0005524 | |
Vra5g0943 | 523 | Pfam | Protein tyrosine and serine/threonine kinase | 49 | 325 | IPR001245 | GO:0004672|GO:0006468 | |
Vra5g0943 | 523 | SUPERFAMILY | Protein kinase-like (PK-like) | 26 | 325 | IPR011009 | - | |
Vra5g0943 | 523 | PANTHER | - | 1 | 476 | - | - | |
Vra5g0943 | 523 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 177 | 189 | IPR008271 | GO:0004672|GO:0006468 | |
Vra5g0943 | 523 | PANTHER | OS01G0750732 PROTEIN | 1 | 476 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g0943 | Vra-Chr5 | 15712984 | 15715027 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g0943 | 31 | 336 | Receptor kinase-like Gene Family | AT3G59420 | 40.193 | 2.51e-67 | 231 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Vra5g0943 | PK_Tyr_Ser-Thr | 1.2e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g0943 | - | - | gmx:100799382 | 741.495 |