Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0924 ATGTCGGAGAAGAAGACCAGAGTGTCTTTTACGGAAAAAGATGCTGTCGCGCTGATGCAGAGGTACGACCCAACTACGGTGTTCATCTTACTTCAGGAAGTTGCGCATTACGCTAAGCCGAAGATTGATTGGAGCGAGTTGGTGAAGAAAAGCGCAACTGGGATTTCTAATGTTAGGGAATATCAAATGCTGTGGCGGCATTTGGCCTACCGGCATTCTTTGCCGGAAAATTTTGAAGTTGGGGCTGAACCTCTGGATGATGACAGTGACTTAGAGTGTGAGCTAGAAGCATTACCTCCTGTTAGTGTGGAATCTGCATCAGAGGCAGCTGCATGTGTGAAGGTAATGATTGCTTCTCGCACACTCAGTGACTCTGCCCCTAGTAGCTCAACAATCGAGGCTCCATTGACTATAAATGTTCCAGTTTGCCATTCATCTGCAACACTTATTGAAAGTTCACAACCCTCTAATTTGATGCAAGGGACAAACATTGTTTTTCCAGTCACTGTTCAGAGACAAACATTGCCAACACATCCTGTACCACCAACAGATGGTATTGAATCTAAGGGATTAGTTGGTGGGAATTTGGCGTCCAAAAGAAAACGGAAAACATGGTCAGAGGAAGAGGACATACAACTACGAGCTGCTGTTCAGAGATGGGGCGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTCCTACACAGTTAGCACAGAGGTGGAGCATTTTACGAAAGAAAGATGGCACTGTCAATTCTGGAACCATATCAACCAGCTCACAATATACTACTGCTGAACAACTGGCAACCCGACATTCTTTATCATTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGAGTGTCAGATCCTGTTAAGACATCCGCATCGGTTAAAAATCAAGTGCAGATTAGAAATACTGTGGAGAAGGTTGCCAGTAGTTTTGTACCACCTCAACAGCCATCTCGGCAAGCTTCTTTGTTGGGATCTGATTCGCATGTAAAACCCAAACTAGTAGATGAAAAACTAGTCTCGAAGGGTAATATAATTTCAAATCCTGTGCTAAAATCTACCACAGCTGCTCCTGGGACACGGATTGATTCACCTTCAAATACTGTATCACATTTTAAAATTGCTCCAGTTAAACACAACGTGGACACCAAGCCTGCAGTGAGCTCTTTGACAAAAACATCCGTTTCTACCAATATGCCTTCTGATCCAAAGAACAAACCGGCTACACCTTTGGCTGATAAAGTTCCATTGGAGCAAGATGCTAATTCCATGAAAGAGTTTAGAGCTTCTGATCTCAGCTCCAGACCGAAAGATCAAACACAAGAAAACGAACCTCCTAAAGTTACTATTGAAAGCCAGGTCAATAGCAACTTAGAGAAGGGAAGATCAGATATAGGTCAAGCGAAGATTGTGCCTATTAGTTGTGGGGAGGAAAGTTTGAAAGATAAAGCAAGTCAAGATGAAAAACAACCAAGTGCTACTAAAGCAACTGCAGTCGTGTCCGAAGACCAAGGAAGTGTTAAGAATGCTACTGAGAATAGCAACCATGACAAGGGAAGCCTAAATTCTAATCAGGACAAGAAAACTTCAATCAATGAAAGTTCAAACAATCAAAAAATGAATGACAAAAATGTAAATTTGCCTGTACAAGATGAAGGCAGCCAAAGTGCCAAGGTGGTAAAAACAGATGGAGAATGTTGA 1737 0.4249 MSEKKTRVSFTEKDAVALMQRYDPTTVFILLQEVAHYAKPKIDWSELVKKSATGISNVREYQMLWRHLAYRHSLPENFEVGAEPLDDDSDLECELEALPPVSVESASEAAACVKVMIASRTLSDSAPSSSTIEAPLTINVPVCHSSATLIESSQPSNLMQGTNIVFPVTVQRQTLPTHPVPPTDGIESKGLVGGNLASKRKRKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGTISTSSQYTTAEQLATRHSLSLALDMPFKKLTAPGVSDPVKTSASVKNQVQIRNTVEKVASSFVPPQQPSRQASLLGSDSHVKPKLVDEKLVSKGNIISNPVLKSTTAAPGTRIDSPSNTVSHFKIAPVKHNVDTKPAVSSLTKTSVSTNMPSDPKNKPATPLADKVPLEQDANSMKEFRASDLSSRPKDQTQENEPPKVTIESQVNSNLEKGRSDIGQAKIVPISCGEESLKDKASQDEKQPSATKATAVVSEDQGSVKNATENSNHDKGSLNSNQDKKTSINESSNNQKMNDKNVNLPVQDEGSQSAKVVKTDGEC* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0924 578 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Vra5g0924 578 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 420 - -
Vra5g0924 578 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Vra5g0924 578 SMART sant 201 253 IPR001005 -
Vra5g0924 578 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 420 - -
Vra5g0924 578 MobiDBLite consensus disorder prediction 396 416 - -
Vra5g0924 578 MobiDBLite consensus disorder prediction 395 578 - -
Vra5g0924 578 MobiDBLite consensus disorder prediction 431 456 - -
Vra5g0924 578 Pfam Myb-like DNA-binding domain 202 247 IPR001005 -
Vra5g0924 578 Gene3D - 196 256 - -
Vra5g0924 578 MobiDBLite consensus disorder prediction 502 569 - -
Vra5g0924 578 MobiDBLite consensus disorder prediction 457 474 - -
Vra5g0924 578 CDD SANT_TRF 203 252 - -
Vra5g0924 578 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vra5g0924 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0924 - - gmx:100799956 778.474