Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0864 ATGGCGGCCGCTCCTACGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCTGAGCAGGCCGAGCGCTACGAAGAAATGGTGGAGTTCATGGAGAAGGTGTCCGCTGCCGCAGACAACGAGGAACTCAACGTCGAGGAGAGGAATCTCCTCTCCGTAGCCTACAAGAACGTGATCGGAGCGCGTCGCGCCTCGTGGCGCATAATCTCCTCGATCGAGCAGAAGGAAGAGAGCCGCGGCAACGAGGATCACGTCACCGTCATCCGCGACTACCGATCCAAGATCGAGTCTGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCGACTCTCGCCTTATTCCCTCGGCTTCCTCCGGCGATTCTAAGGTCTTCTACCTCAAGATGAAGGGCGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCTGAGCGCAAGGAGGCTGCTGAGAGCACTCTCGCTGCATACAAATCGGCTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCAATTAGGCTCGGCCTTGCTCTGAACTTCTCCGTATTTTACTATGAAATCCTTAACTCTCCTGATCGCGCCTGCAACCTTGCAAAACAGGCTTTTGATGAAGCGATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTGCTTCGTGATAACCTCACCCTTTGGACCTCGGACATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCACCGAAACAGGATGATCAGGAGGTGTTTGTTGCTTATATCTTTGGTGCTGGAATTTTAGGCATTCATGTCTGTTATGAATTGTGGATGTACTGGGCCGTTTTAGTTTGTCCTTCCATTTTCAAGTGTTTTCCAAATTGCCTATTTTATTAA 909 0.5116 MAAAPTPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELNVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKQDDQEVFVAYIFGAGILGIHVCYELWMYWAVLVCPSIFKCFPNCLFY* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0864 302 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Vra5g0864 302 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vra5g0864 302 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Vra5g0864 302 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Vra5g0864 302 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Vra5g0864 302 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Vra5g0864 302 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Vra5g0864 302 SMART 1433_4 8 251 IPR023410 -
Vra5g0864 302 Coils Coil 14 41 - -
Vra5g0864 302 Pfam 14-3-3 protein 14 238 IPR023410 -
Vra5g0864 302 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Vra5g0864 302 Gene3D - 2 251 IPR036815 -
Vra5g0864 302 PANTHER 14-3-3 PROTEIN 5 253 IPR000308 -
Vra5g0864 302 PANTHER 14-3-3-LIKE PROTEIN 16R-RELATED 5 253 - -
Vra5g0864 302 CDD 14-3-3_plant 8 244 - -
Vra5g0864 302 PIRSF 14-3-3 2 250 IPR000308 -
Vra5g0864 302 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0864 Vra-Chr5 14577171 14579349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0864 6 260 14-3-3 family AT1G78300 90.234 8.83e-169 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0864 K06630 - gmx:100529128 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0864 5 14577171 14579349 Vra5g0864 5 14577171 14579349 ECH