Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0827 ATGAGCAAACCCAAAACCCAAAGAAAACCGACCATTACAAAACATGTCAGCCAAAACCAAAACCAAAACCAAGAGCTACAGAAAACAGAAAAACAACCTTCATGGGTGGTAAGAGGCCTGTTGGCTTGTAGGAATGTTCAAATCCAGCAACATCAGCAGCAGCAGCAGAAGGAAGCAAAACCACCTCCAGAAGCAAAAGATCATCAACACAGGAAAAAACAGGAACAGAGAAAGCTGCAGGAGGAAAGAATCCCGGAAGATAACAGCAAGAAGTGCAAGAAGATGAAGTGCTCAGGTTCGCTTTGTAACAACACCAAGATCACGGCAAAGCCGGACACATCAACCCCAGATATCCACAAGAAAAGGTTGTTTCTAAATGGATGCAACAGCAACGATGCTTCCAGCAGATCCATGAAAGCACCTCTTACCGAACACAATGGACCCGTCTCAGCTTCTTCCTCTTCATTGTCAGCATCTTCCAATTCTTCTGGCGCTGGCTCTTTCAGGGGAATGCCATTCAGGAGACTTTCCGGCTGTTACGAGTGTAGAATGGTGGTAGACCCGGTTCTAGGCTTCACTAGAGATCCTTCTCTCAGGAGTAGCATCTGTTCTTGCCCCGACTGTGGCGAGATCATGAAAGCTGAAAGCTTGGAGCATCACCAGGCAGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGACACCAGCAAGAACATAGTTGAAATAATATTCCACTCCAGCTGGCTGAAGAAGCAATCTCCAGTGTGCAAAATAGACCGCATCCTCAAGGTTCACAACACCCAGAAAACCATTACCAGATTCGAAGAATACAGAGACTCCATAAAAGCAAAGGCCACGAAACTCCCCAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTACTCAGGTTTCACTGCACCTCCTTTGCGTGTTCTCTAGGCCTAAACGGGTCCTCCAACTTGTGCAACTCCGTTCCGCAGTGCAACGTTTGCAGCATAATCAAGCACGGGTTCAAGGTTACAGGAGGAAGCGGTATCTTGACAACGGCAACGAGTGGGAAGGCTCACGACAAGGCTTGTGTGGATGAGAGTGAAGAGAAGAGAGCAATGCTGGTTTGTCGGGTTATAGCAGGAAGGGTGAAGAAGAATGCAGAAGGAGGCATGGAGGAGTATGATTCGGTTGCAGGGGCTGTTGGGGCTTATTCCAATTTGGATGAGTTGGTTGTGTTCAACCCAAGAGCCATTTTGCCTTGCTTTGTTGTAATCTATAGTGGCTTTTGA 1284 0.4735 MSKPKTQRKPTITKHVSQNQNQNQELQKTEKQPSWVVRGLLACRNVQIQQHQQQQQKEAKPPPEAKDHQHRKKQEQRKLQEERIPEDNSKKCKKMKCSGSLCNNTKITAKPDTSTPDIHKKRLFLNGCNSNDASSRSMKAPLTEHNGPVSASSSSLSASSNSSGAGSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITRFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHCTSFACSLGLNGSSNLCNSVPQCNVCSIIKHGFKVTGGSGILTTATSGKAHDKACVDESEEKRAMLVCRVIAGRVKKNAEGGMEEYDSVAGAVGAYSNLDELVVFNPRAILPCFVVIYSGF* 428
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0827 427 MobiDBLite consensus disorder prediction 134 167 - -
Vra5g0827 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 40 425 - -
Vra5g0827 427 SUPERFAMILY ADP-ribosylation 227 426 - -
Vra5g0827 427 MobiDBLite consensus disorder prediction 11 31 - -
Vra5g0827 427 Coils Coil 12 32 - -
Vra5g0827 427 Gene3D - 226 425 - -
Vra5g0827 427 MobiDBLite consensus disorder prediction 60 94 - -
Vra5g0827 427 MobiDBLite consensus disorder prediction 1 33 - -
Vra5g0827 427 MobiDBLite consensus disorder prediction 47 96 - -
Vra5g0827 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 40 425 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra5g0827 Vra-Chr5 14004756 14007274 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0827 168 424 C2H2 Transcription Factor Family AT1G75710 55.326 5.31e-102 309
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0827 - - gmx:100817333 739.954
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0827 5 14004756 14007274 Vra5g0827 5 14004756 14007274 ECH