Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0802 ATGGAACAACAGTACTGTCGTTGTGCTAGTTTTGGAACCACCTTCAGTAGGGCAAAGCCTTATTTGTTAACGGTCGGACTTCAATTTGGGTTCGCCGGAGCTCTCATCTTCTCCGTCGCCAGTCTCAACCATGGAATGAATCGTTACGTTTTCGTCGTCTATCGTAATGCCATCGCTGCTTTGGCCCTGGCTCCTTTTGCATTGATTTTTGAGAGGAAAATTAGGCCCAAGATAACACTCCCTGTCTTCTTCCACATAATGGCACTCGGATTTGTGGAACCAGTGATTGATCAGGGCTTCACGTTCTTGGGAATGCAATACACATCAGCATCGTTTACCTCTGCCATAATGAATGCGGTGCCTTCTGTGACTTTTGTGCTAGCAGTAATTCTAAGGTTAGAGCGTGTAAATGTTAAGGAAGTAAGGAGCCTAGCGAAGGTGATTGGGACATTGGTGACATTTTCAGGTGCTTTGTTAATGACACTTTACAAAGGTCCTGAATTTAACCTATTTCATTCTGCAAACGCAACCCACAACCAAGACGGAGCTCACTCTCCACAAGTTGTTAAACACTGGCTCTCAGGGACTCTCTTTCTTCTCCTGGGTTGTGTCGCTTGGTCATCTTTCTTCATTTTACAGTCCATAGCACTGAAAAGGTATCCGGCAGAATTGTCTCTCTCTTCTTTGGTGTGCTTATCTGGTGCCGTGCAAGCTAGTGTGGTGGCGATTATTGCCACTCGTCATTCTGGGCTTCCGGCATGGGCCTTGGGCTGGGACTTCAGACTCTACGGCCCTCTCTACACGGGAATTGTTACCTCTGGAATAACGTATTATGCGCAAGGGTTGGTGTTGCAAAGCAGGGGCCCGGTGTTTTTAACTGCCTTTAATCCTCTTTGCATGGTCATAACCTGTGCTTTAGGCTCCTTCCTTTTTGCAGAGCAACTTCACTTGGGCAGTATCATCGGAGCTGTCATTATCGCATTGGGTCTGTACTTTGTGGTGTGGGGCAAAGGCAAAGACCATTCAGACCCCACGCCATCATCTCCTACAGCAAAGCAAATGGAGACACAAAAATTGCCAATTTCTTCATCTGATATCTGA 1101 0.4659 MEQQYCRCASFGTTFSRAKPYLLTVGLQFGFAGALIFSVASLNHGMNRYVFVVYRNAIAALALAPFALIFERKIRPKITLPVFFHIMALGFVEPVIDQGFTFLGMQYTSASFTSAIMNAVPSVTFVLAVILRLERVNVKEVRSLAKVIGTLVTFSGALLMTLYKGPEFNLFHSANATHNQDGAHSPQVVKHWLSGTLFLLLGCVAWSSFFILQSIALKRYPAELSLSSLVCLSGAVQASVVAIIATRHSGLPAWALGWDFRLYGPLYTGIVTSGITYYAQGLVLQSRGPVFLTAFNPLCMVITCALGSFLFAEQLHLGSIIGAVIIALGLYFVVWGKGKDHSDPTPSSPTAKQMETQKLPISSSDI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0802 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 339 - -
Vra5g0802 366 Pfam EamA-like transporter family 20 161 IPR000620 GO:0016020|GO:0016021
Vra5g0802 366 Pfam EamA-like transporter family 194 334 IPR000620 GO:0016020|GO:0016021
Vra5g0802 366 MobiDBLite consensus disorder prediction 342 366 - -
Vra5g0802 366 PANTHER WAT1-RELATED PROTEIN 14 360 IPR030184 GO:0016021|GO:0022857
Vra5g0802 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 165 - -
Vra5g0802 366 PANTHER WAT1-RELATED PROTEIN 14 360 - -
Vra5g0802 366 MobiDBLite consensus disorder prediction 343 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0802 Vra-Chr5 13669753 13672677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0802 12 363 Nodulin-like Gene Family AT1G44800 47.740 2.24e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0802 - - gmx:100812537 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0802 5 13669753 13672677 Vra5g0802 5 13669753 13672677 ECH