Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0801 ATGGGTGCGTGGTTGAGAAATGCAAGGCCCTATCTGTTGTTATTGGCTGTTCAATTTGGTTCTGCTGGCATGTTCATATTTGCCATGGATGCTATAAAGAAGGGTATGAGTCATTACGTCTTCATTGTCTACCGTAATGCCATCGCCTCTGTTACTCTCGCTCCCTTCGCCTTTGTTCTTGAAAGGAAAGTTAGGCCCAAGATGACTTTCCGAGTATTTTCAGAGATTATGGCACTGGCTTTCTTCGAAATAATACTGGATCAGTGTTTCGCTCTATTGGGCATGAAATTCACGTCTGCTTCTTTCTTATCTGCTGTCATGAACTCTGCTCCCTCTATTACTTTTGTGATGGCAGTCATTCTAGGAATGGAGCACATGAAAATTAAGGAGGTAGCATGTCAAGCGAAAGTGATTGGCACCGTAGTAACATTTGGAGGAACCTTGCTTATGGCACTGTACAAAGGCCCCGTCCTTAGTTTCATGAGATCTTCGAGCAGCCATGCTAGCCAAACTGAGAACGTGACCAACCCCACTGGCAACCATTGGGTAATAGGAACAGTGTTCCTCCTCATTGGTTGTGCAGGCTTTTCTGCATTTTACATATTACAGGCCATAACATTGAGAAAATACCCAGCAGAGATGTCGTTGGCCACTTGGGTTTGCTTTGTAGGAGCACTTCAAAGCTCTGTTGTTGCAATCTTCGCAGAACGCCACCACCCTCATGCTTGGTCCCTTGGTTGGGACACACGACTCTTTGCCCCTGCTTACGCGGGAATAGTTACATCAGGAGTTCAGTATTACATACAAGGCATGGTGATAAAATCCATGGGTCCAGTTATTGTGACTGCTTTCAATCCTCTGCGTATGATCATTGTTACGGGCTTGGCCTGCATCATCCTATCTGAGCAACTCTACCTTGGAAGTATAATTGGAGCAATAGTTGTTGTGCTGGGGCTTTATCTAGTAGTGTGGGGAAAAGCTAAAGAACGCAGAGGTCTGACGCCACCATCTCCTACAGAGGATAACTTCACCGAAGATCAACGACAGCTACCGGTCACAGCTCGAAGGAATGATAGTGATGACAATAAGGCTTAA 1095 0.4548 MGAWLRNARPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASVTLAPFAFVLERKVRPKMTFRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSITFVMAVILGMEHMKIKEVACQAKVIGTVVTFGGTLLMALYKGPVLSFMRSSSSHASQTENVTNPTGNHWVIGTVFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSVVAIFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIVTGLACIILSEQLYLGSIIGAIVVVLGLYLVVWGKAKERRGLTPPSPTEDNFTEDQRQLPVTARRNDSDDNKA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0801 364 MobiDBLite consensus disorder prediction 331 364 - -
Vra5g0801 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 328 - -
Vra5g0801 364 PANTHER WAT1-RELATED PROTEIN 7 354 IPR030184 GO:0016021|GO:0022857
Vra5g0801 364 PANTHER WAT1-RELATED PROTEIN 7 354 - -
Vra5g0801 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Vra5g0801 364 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Vra5g0801 364 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0801 Vra-Chr5 13646110 13649573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0801 5 363 Nodulin-like Gene Family AT2G37460 43.611 2.44e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0801 - - gmx:100811984 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0801 5 13646110 13649573 Vra5g0801 5 13646110 13649573 ECH