Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0800 ATGATTGTTGCAGATAAAGAGAAGCAGGTATATAAGGAATTTCCATCACTTCTCACTCAGAGAGAGAATAAGATGCGTACGTGGTTCACTAATGCAAAGCCGTATCTGCTGTTATTGGCCGTTCAATTTGGCTCCGCCGGCATGTTCATTTTCGCCATGGATGCCATGAGAAAGGGCATGAGCCATTACGTCTTCACCGTCTACCGTAATCTCATCGCCTTTCTCACTCTCTCCCCCTTTGCATTTCTTCTTGAAAGGAAAGTTCGGCCCAAGATGACTGTTGGTGTATTTTCAGAGATTATGGCACTGGCTTTTTTCGAGATAATACTTGACCAGTGTTTCGCTCTCTTGGGCATGAAATTCACGTCAGCTTCTTTCCTATCTGCTGTCATGAACTCCGCACCCTCTGTTACTTTTGTCATGGCTGTTATTCTAAAATTGGAACACATGAAGATGAAGGAGGCAACATGTAAAGCGAAAGTGATTGGAACTATAGTAAGTTTTGGAGGAACTTTGCTGATGGCACTGTACAAAGGCCCGGCACTTAGTGTTATGGGATCTTCAACCACCCAACCTCAGAACGTCAACAGCCCCACCGGTAACCACTGGATCATAGGGACAGCTTTCCTCCTTATTGGTTGTGCAGGCTTTTCTGCCTTTTACATATTACAAGTCATTACATTGAGAAAATACCCAGCAGAGATGTCCCTGGCTACTTGGGTTTGCTTTGTCGGTGCCCTTCAAAGTTCTATCGTGGCATTCTTCGCAGAACACCACCACCCTCATGCCTGGTCCATTGGTTGGGATACACGATTCTTTGCTCCTGCTTACGCGGGAATAGTTTCATCCGGAGTTCAGTATTACATACAAGGCGTGGTGATCAAATCCATGGGCCCAGTTATTGTGACTGCTTTTAATCCCCTTCGTATGATCATCATTACCACCTTGGCCTGCATCGTCCTCTCTGAGAAACTCTACCTTGGAAGTATTATTGGAGCAGTAGTTGTGGTTCTTGGACTGTATCTTGTTGTGTGGGGAAAATATAAAGAATGCCAACAAAGGATAATGCCACCATCCCCTGCAAATGATATCCCTCCAGAAGATCAACGTCAGCTACCTGTCACAGCTCCTAGGAATGATAGCAACGATAATAATGCTTAA 1161 0.4488 MIVADKEKQVYKEFPSLLTQRENKMRTWFTNAKPYLLLLAVQFGSAGMFIFAMDAMRKGMSHYVFTVYRNLIAFLTLSPFAFLLERKVRPKMTVGVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILKLEHMKMKEATCKAKVIGTIVSFGGTLLMALYKGPALSVMGSSTTQPQNVNSPTGNHWIIGTAFLLIGCAGFSAFYILQVITLRKYPAEMSLATWVCFVGALQSSIVAFFAEHHHPHAWSIGWDTRFFAPAYAGIVSSGVQYYIQGVVIKSMGPVIVTAFNPLRMIIITTLACIVLSEKLYLGSIIGAVVVVLGLYLVVWGKYKECQQRIMPPSPANDIPPEDQRQLPVTAPRNDSNDNNA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0800 386 PANTHER WAT1-RELATED PROTEIN 31 376 - -
Vra5g0800 386 PANTHER WAT1-RELATED PROTEIN 31 376 IPR030184 GO:0016021|GO:0022857
Vra5g0800 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 178 - -
Vra5g0800 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 348 - -
Vra5g0800 386 Pfam EamA-like transporter family 33 175 IPR000620 GO:0016020|GO:0016021
Vra5g0800 386 Pfam EamA-like transporter family 205 344 IPR000620 GO:0016020|GO:0016021
Vra5g0800 386 MobiDBLite consensus disorder prediction 357 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0800 Vra-Chr5 13630071 13632963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0800 21 384 Nodulin-like Gene Family AT2G37460 40.385 1.34e-102 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0800 5 13630071 13632963 Vra5g0800 5 13630071 13632963 ECH