Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0799 ATGGTTACGTGGTTGAGAAATGCAAGGCCCTATCTGATGTTACTGGCTGTTCAATTTGGTTCTGCTGGCATGTTCATATTTGCCATGGATGCTATAAAGAAGGGTATGAGCCATTACGTCTTCATTGTCTACCGTAACGCCATAGCCTCTATAACTCTAGCTCCCTTCGCCTTTGTTCTTGAAAGGAAAGTTCGGCCGAAGATGACTGTCGGTATATTTTCAGAGATTATGGCACTGGCTTTCTTCGAGATAATACTGGATCAGTGTTTCGCTCTCTTGGGCATGAAGTTCACGTCAGCTTCTTTCCTATCTGCTGTCATGAACTCTGCACCCTCTGTTACTTTTGTCATGGCTGTTATTCTGAGGTTGGAGCACATGAAGATAAAGGAGGTGGCATGTCAAGCCAAATTGATTGGAACAATAGTAACTTTTGGAGGAACCTTGCTAATGGCACTTTACAAAGGCCCTGTGATTACTTTGATGAAATCTTCAACAACTCATGCTGCCCAACCTCAGACTCTGAACAACCCCACCGCTAACCACTGGATCCTAGGAACATGTTTCCTCCTCATCGGTTGTGCAGGCTTCTCTGCGTTTTACATATTACAAACCATAACATTGAGAAAATACCCAACAGAGATGTCCCTGGCGACTTGGGTTTGCTTCGTAGGTGCACTTCAAAGCTCTGTTGTAGCAGCCATCGCAGAACGCCGCCACCCTCATGCATGGGCCATTGGTTGGGATACACGACTCTTTGCTCCAGCTTATGCAGGAATAGTTACATCAGGAGTTCAGTATTACATACAAGGCATGGTGATTAAATCGATGGGCCCAGTTATTGTGACTGCTTTTAATCCTCTTCGTATGATCATCATTACCACCTTGGCCTGCATCATTCTATCTGAGCAACTCTACCTTGGAAGTGTTATTGGAGCTATAGTTGTGGTTCTTGGGCTATATCTAGTCGTGTGGGGAAAAGCTAAAGAATGCCAACGAAGAATGCCACCATCCCCTGCAAAGGATAACTTTCCAGAAGACCAACGACAGCTACCTGTTACAGCTCCTAGGAATGATAATAAGGGTTAA 1086 0.4475 MVTWLRNARPYLMLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASITLAPFAFVLERKVRPKMTVGIFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILRLEHMKIKEVACQAKLIGTIVTFGGTLLMALYKGPVITLMKSSTTHAAQPQTLNNPTANHWILGTCFLLIGCAGFSAFYILQTITLRKYPTEMSLATWVCFVGALQSSVVAAIAERRHPHAWAIGWDTRLFAPAYAGIVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIITTLACIILSEQLYLGSVIGAIVVVLGLYLVVWGKAKECQRRMPPSPAKDNFPEDQRQLPVTAPRNDNKG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0799 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 327 - -
Vra5g0799 361 PANTHER WAT1-RELATED PROTEIN 7 353 IPR030184 GO:0016021|GO:0022857
Vra5g0799 361 MobiDBLite consensus disorder prediction 332 361 - -
Vra5g0799 361 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Vra5g0799 361 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Vra5g0799 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Vra5g0799 361 PANTHER WAT1-RELATED PROTEIN 7 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0799 Vra-Chr5 13620292 13624361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0799 5 359 Nodulin-like Gene Family AT2G37460 43.380 2.25e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0799 - - gmx:102665912 632.484