Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0798 ATGGAGGACCAAAATGGTGGTGGTAAGTTCAGCCAAGGGCTTCGCAAGTTGAAGCCTTACCTTGCTATATTGTCCCTTCAGTTCGGCTACTCAGGCATGTATATCATCACCATGGTTTCTTTCAAGCATGGCATGAGTCATTGGATACTCTCAGTTTACCGTCACGTAGTTGCCGCCATTATCATAGTCCCTTTTGCACTTGTCCTTGAAAGAAAAATTAGACCAAAGATGACTCTTCCCATCTTCCTCAGGATAGTCGCACTTGGTTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGAATGAAAATGACTTCAACAACGTTTGCATCCGCCACAGTTAATGTCCTCCCAGCCATTACTTTTATTATGGCTCTCATTTTCAGGCTGGAGAAGGTGAACCTGAGAAAATTTCACAGCCTAGCGAAGGTCATTGGAACGGTTATAACAGTTTCAGGAGCTATGGTTATGACTCTGTACAAAGGTCCTGCCTTCCAAATCATAAAGGGTGGAGGAGCCATCAGCAGCCACAGCAACTCTAGCAGTAGTACCACTGAACCCTCTGATCAACACTGGGTGGTTGGCACAGTCATGCTCATATCAAGTTGTGCCAGTTGGGCTGGTTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTCTCACTCACAGCATGGATTTGCGTAATGGGAATCATTGAGGGTTCAATCGCATCCCTTATATTTGAACGAGACTTTAGTGTATGGGTCATAGGCTGGGATTCAAGGCTTCTTGCTTGTGTGTATTCTGGGGTGATTTGTTCTGGAATGGCGTACTATGTACAAGGGGTTGTGACCAGGGAACGTGGACCTGTGTTTGTGACATCTTTCAGCCCTCTATGTATGATAATCACCGCTGCATTGGGTTCTCTTGTTTTAGCCGAACAAGTTCATCTTGGAAGTATATTTGGGGCTATTCTGATCGTGTGCGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCGTGTGAACACAAGAGAAACAGGGAAAGAAGCAAGGCAAGAATTGCCAATGAAGGACAGTACAAAATCAGCGTCAGACAACTTTTATGGGCTTGAGATCAATGTTTCAGATGAGGTGTTGAGGAAAGGTGTCCCACCAACAACCTTATCATGA 1173 0.4501 MEDQNGGGKFSQGLRKLKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALIFRLEKVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAISSHSNSSSSTTEPSDQHWVVGTVMLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDFSVWVIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRVNTRETGKEARQELPMKDSTKSASDNFYGLEINVSDEVLRKGVPPTTLS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0798 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Vra5g0798 390 MobiDBLite consensus disorder prediction 345 359 - -
Vra5g0798 390 MobiDBLite consensus disorder prediction 345 364 - -
Vra5g0798 390 PANTHER WAT1-RELATED PROTEIN 13 362 IPR030184 GO:0016021|GO:0022857
Vra5g0798 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
Vra5g0798 390 PANTHER WAT1-RELATED PROTEIN 13 362 - -
Vra5g0798 390 Pfam EamA-like transporter family 197 334 IPR000620 GO:0016020|GO:0016021
Vra5g0798 390 Pfam EamA-like transporter family 28 152 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0798 Vra-Chr5 13593013 13596496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0798 7 374 Nodulin-like Gene Family AT4G08300 66.304 4.07e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0798 - - gmx:100811114 680.248