Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0777 ATGGCAGAGCGTGTGTTCCTCACTGCTTCGTCACGGCCTTTACCATCTCAACAGCACACTTCAACCGCAATGGCTCTTTTCAGCGGCGCCGCCTCCGCTCGCATCATTCCCTCCGTCTCACTCTCCTCCTCTACTCGCTCATTTTTCTCCCTCTCATCCTCTTCTTCTTCGCTTCAGTGCTTGCGCTCTTCTCCTCGCATTTCGCACCTGTTTCTCAATCAGAGGAGAGCGGAGGTTCGCTTTTCGAGTGGAGGATACGGAACGGTGTCGGCGCCGAAGTCCTTCGCGTCTGATCCTGATCAGTTGAAGAGCGCTAGAGAAGATATCAAGGAGCTTCTCAGGTCAAAGTTCTGTCATCCTATTCTGATTCGTTTGGGGTGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAATGGCCACAAAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAATTGAGCTGAAACATGGAGCCAATGCTGGACTCGTAAATGCATTGAAGCTTCTTCAGCCGATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGCGCCACAGCTGTGGAGGAAGCTGGAGGCCCAAAACTCCCTATGAAATATGGAAGAGTGGATGTTTCTGGACCTGAACAATGTCCCGAAGAAGGGAGACTTCCTGATGCTGGTCCCCCTTCACCTGCTGATCATTTGCGTCAAGTTTTCTACCGAATGGGTTTGAATGACAAGGAAATTGTTGTATTATCTGGTGCACACACACTGGGGAGGTCTAGACCAGATCGTAGTGGTTGGGGAAAGCCTGAGACTAAATATACAAAAGATGGGCCAGGAGCACCTGGAGGACAATCCTGGACAGTGCAATGGTTGAAATTTGACAACTCTTACTTCAAGGACATCAAGGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGAAGACCCATCCTTCAAGGTATATGCTGAGAAGTATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCTAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGAATTGTGATAGATGAATCCCCAAATGCAGGGGCAGAGAAGTTCGTAGCAGCCAAATACTCCACTGGAAAGAGAGAGCTGTCTGAAGCAATGAAGCAGAAGATACGGGCTGAATATGAGGCCGTTGGTGGAAGCCCAGATAAGCCTCTACAGTCAAACTATTTTCTAAATATCATGATTATTATTGCAGTTTTGGCACTTTTGACATCACTTCTTGGAAATTAG 1314 0.4642 MAERVFLTASSRPLPSQQHTSTAMALFSGAASARIIPSVSLSSSTRSFFSLSSSSSSLQCLRSSPRISHLFLNQRRAEVRFSSGGYGTVSAPKSFASDPDQLKSAREDIKELLRSKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEIELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKLPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVVLSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDESPNAGAEKFVAAKYSTGKRELSEAMKQKIRAEYEAVGGSPDKPLQSNYFLNIMIIIAVLALLTSLLGN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0777 437 ProSiteProfiles Plant heme peroxidase family profile. 181 406 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 Gene3D - 105 358 - -
Vra5g0777 437 Pfam Peroxidase 106 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 CDD ascorbate_peroxidase 90 360 - -
Vra5g0777 437 MobiDBLite consensus disorder prediction 259 285 - -
Vra5g0777 437 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 23 437 IPR044831 GO:0004601|GO:0034599
Vra5g0777 437 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 23 437 - -
Vra5g0777 437 Gene3D Peroxidase, domain 2 227 350 - -
Vra5g0777 437 PRINTS Plant ascorbate peroxidase signature 98 118 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Plant ascorbate peroxidase signature 119 134 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Plant ascorbate peroxidase signature 180 198 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Plant ascorbate peroxidase signature 199 211 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Plant ascorbate peroxidase signature 318 342 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 ProSitePatterns Peroxidases proximal heme-ligand signature. 249 259 IPR019793 -
Vra5g0777 437 PRINTS Haem peroxidase superfamily signature 119 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Haem peroxidase superfamily signature 181 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Haem peroxidase superfamily signature 199 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 PRINTS Haem peroxidase superfamily signature 289 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g0777 437 SUPERFAMILY Heme-dependent peroxidases 99 358 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0777 Vra-Chr5 13332721 13342121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0777 105 355 Peroxidase AT5G66390 28.669 2.58e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0777 K00434 - zju:107421087 684.871