Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0773 ATGCACCCACTAATACCAAAACAAAAAAATAAATCAAAAATCAAAAATCAAAAGCTACCACGGATAATTACATTCCACCTCTTCTTCCCATTCTCTTTTTTTCTCTCTCCCTCCCTCAATTACTCATACATTTTAAACCAGCTATGTATATATATTGCAAGTAAACATATAGATAGTGTTCAGAAGCTTATTCTCAACCCTGATATGGAGTTTGTGGATAACAGAAAACTACAGTTACAACAACAGCCGCAACCGCAGGAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGGTTCTTCATGCAAAGTCACCTGCGTGGACTCCGGAGACAAGGCTTTGAAATATCTTGGGTTGGTTGATGACCTTCATGATAATACTACTTCTTCAACCTCTTTAGAATCATCATCTTCTCCTCCACCTCAACCATTGCAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCCGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAAGAGTTTCTGCTGAAGCCTCTTCAGTTATCAGATCTGGACAAGCTTCAATCATACTTTCTGAAATCTTGTGAAAATGAATCTGCTAACAGTTGCATAGATTCGGAGAATGAGAATGTGATCATTAACATCAGTAACCATAACAATAGCAGTAACAGTATTAGCAAAAGAAAGAACATATCTCCAGACTCTCATCAGGAGAGATCAAGACCCAAAATGAAGGAGTTGGCTGTGGTGTAA 882 0.398 MHPLIPKQKNKSKIKNQKLPRIITFHLFFPFSFFLSPSLNYSYILNQLCIYIASKHIDSVQKLILNPDMEFVDNRKLQLQQQPQPQEQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLVDDLHDNTTSSTSLESSSSPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLDKLQSYFLKSCENESANSCIDSENENVIINISNHNNSSNSISKRKNISPDSHQERSRPKMKELAVV* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0773 293 MobiDBLite consensus disorder prediction 274 293 - -
Vra5g0773 293 ProSiteProfiles Response regulatory domain profile. 91 235 IPR001789 GO:0000160
Vra5g0773 293 MobiDBLite consensus disorder prediction 265 293 - -
Vra5g0773 293 SMART REC_2 90 231 IPR001789 GO:0000160
Vra5g0773 293 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 74 292 - -
Vra5g0773 293 Gene3D - 91 282 - -
Vra5g0773 293 PANTHER TWO-COMPONENT RESPONSE REGULATOR 74 292 IPR045279 GO:0009736
Vra5g0773 293 CDD REC_typeA_ARR 92 230 - -
Vra5g0773 293 Pfam Response regulator receiver domain 162 228 IPR001789 GO:0000160
Vra5g0773 293 SUPERFAMILY CheY-like 90 236 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0773 Vra-Chr5 13232492 13235295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0773 87 237 Response Regulator Gene Family AT3G57040 59.211 1.53e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra5g0773 Response_reg 5.2e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0773 K14492 - gmx:100801334 310.071