Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0768 ATGGGCGATAAGGTGGAGACGCTTGGGAGATTAGCCCAGTGGAAAATCGACAACTTTGGACTTTGTTCCTACAAAAAATCTGACCCTTTCAAGGTCGGAATCTGGAACTGGTACTTTTCAATTGTGAGGAATAAGTACTTCTTCATACATCTTTTTCCGGAACCGTCTACGGTTTCTAAGAATCAACCACCGTTTGCTCGATTCATTCTTCGAGTCTCCAATGCTGGCTCATCTCGCAGCTTTCATATTTCCCCTGTTCAAGAAAAGCTGCTCAGGTCACATGATGACTTTGTCTGGCCTGTGGAAACTACTTTTGTTGGTCGCTACATCATTGATGTTGAGTTTCTAGACCTGAAGATAAATGGAGAAGAAACTAGTTCTGTGTGGCCACCTGATGAAAATGTGCAATCCATCGCATCCCAAAGTAGCAGTATTCGTGGCCTCTCTCGCATGCTTGAAGAGGCTATACATGCAGACCTAACCATCATCACTGCTGATGGCTCATTGAGAGCTCATAAGGCAGTTCTCTCAGCAAGTTCTCCAGTGTTCCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCTTCTACAATCCATATAGAAGACATGTCACTTGAATCCTGCACGGTTCTTCTTAGTTTCTTGTATGGAACAATCAAGAAAAAAGATTTCTTGAAACACCGGCTTGCATTACTCGGAGCTGCTAATAAATATGACATTGGTGGTCTCAAAGACATCTGTGAGGAAAGCCTTCTGGAAGGTCTTCACTCAAGAAATGTTCTTGACATGCTAAATGAGGCTTGGTTATATCAATTGCTCAAGTTAAAGAAAGGGTGTTTTGTGTTATTATTTGAATTTGGTAAGGTACATGATATGAAGGATGAAATGAATAATTTTTTACAACATGCAGATAGGGAGCTAATGGTTGAGATGTTTCAGGAGTTGCTTTCAGTTTCGAACCCATGTATAAGTTAA 978 0.411 MGDKVETLGRLAQWKIDNFGLCSYKKSDPFKVGIWNWYFSIVRNKYFFIHLFPEPSTVSKNQPPFARFILRVSNAGSSRSFHISPVQEKLLRSHDDFVWPVETTFVGRYIIDVEFLDLKINGEETSSVWPPDENVQSIASQSSSIRGLSRMLEEAIHADLTIITADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTVLLSFLYGTIKKKDFLKHRLALLGAANKYDIGGLKDICEESLLEGLHSRNVLDMLNEAWLYQLLKLKKGCFVLLFEFGKVHDMKDEMNNFLQHADRELMVEMFQELLSVSNPCIS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0768 325 SMART BTB_4 158 256 IPR000210 GO:0005515
Vra5g0768 325 PANTHER OS08G0495500 PROTEIN-RELATED 1 322 IPR044714 -
Vra5g0768 325 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 1 322 - -
Vra5g0768 325 SUPERFAMILY POZ domain 142 254 IPR011333 -
Vra5g0768 325 Pfam BTB/POZ domain 150 254 IPR000210 GO:0005515
Vra5g0768 325 Gene3D Potassium Channel Kv1.1; Chain A 132 284 IPR011333 -
Vra5g0768 325 CDD MATH 14 84 IPR002083 GO:0005515
Vra5g0768 325 ProSiteProfiles BTB domain profile. 158 217 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0768 Vra-Chr5 13092522 13095266 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vra5g0768 BTB 4.5e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0768 K10523 - gmx:100787262 556.984