Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0744 ATGCAATTGTATCATCATCCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCGTTGGAAGAGAAAAGCATTGATTACACATCACACCATGTCAATCCTGTAACTGGCAAGAACTTGGATTCTTCATTCTTCAAGATGAATCCTGGTGGAAGACTCCCAGTTTTCCAAAATGGCTCTCACATTCTTTACAAGACTATTGATATAATCCAGTACATAGAAAGAATTGCCGTGTTCTCCTCTGGGTCTGAAAATATCAGTAGCAGTAACAAGGAAGTGATTGAATGGATGCAGAAGGTACAAGAGTGGAATCCAAAGTATTTTTCCCTTTCCCATGTACCAGAGAAATACAGAATATATGTTTCTAAGTTCTTAAGAAGAGTGGTGATTGCTCGAATGTCCGAGTCACCAGAACTAGCAGGTGCTTACCATAGGAAGTTAAAAGAAGCATATCAAACTGAAGAGAGAGTGAAAGATTCAGAAGTGTTGATAAGGAGCAGGGAGCATTTGATTAGGCTGCTTGATGAAGTAGAGAAGCAGCTGAGTGAAACGCCTTATTTAGCAGGTCAAGAGTTTACTATGGCTGATGTAATGCTCATTCCAGTGTTGTCTCGTTTAGTGCTCTTGGATTTAGAGAAAGAGTACATAACTGGGAGGCCAAACATTGCTGAGTATTGGGTTTTGATTCAGCAGAGGCCTAGTTATAGGAAAGTGATTGGTAGGTATTTTGATGGTTGGAAAAAGCATAAGACATTGTTAAAAACTTGGTGCTTTGTTCGTGTTAGAAGTTTGCTGAAGAGATACTGA 804 0.3968 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFSSGSENISSSNKEVIEWMQKVQEWNPKYFSLSHVPEKYRIYVSKFLRRVVIARMSESPELAGAYHRKLKEAYQTEERVKDSEVLIRSREHLIRLLDEVEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLIQQRPSYRKVIGRYFDGWKKHKTLLKTWCFVRVRSLLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0744 267 CDD GST_N_family 1 73 - -
Vra5g0744 267 CDD GST_C_family 148 225 - -
Vra5g0744 267 SUPERFAMILY GST C-terminal domain-like 151 239 IPR036282 -
Vra5g0744 267 Gene3D - 120 238 - -
Vra5g0744 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Vra5g0744 267 Gene3D Glutaredoxin 1 75 - -
Vra5g0744 267 Pfam Glutathione S-transferase, C-terminal domain 165 224 - -
Vra5g0744 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Vra5g0744 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Vra5g0744 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vra5g0744 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 252 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0744 Vra-Chr5 12691192 12694340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0744 1 267 Glutathione S-transferase Gene Family AT1G77290 67.416 4.75e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0744 K22077 - gmx:100792543 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0744 5 12691192 12694340 Vra5g0744 5 12691192 12694340 ECH
Vra6g1408 6 27704964 27707605 Vra5g0744 5 12691192 12694340 PCT