Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0662 ATGGAATGTAAAAAGGATGGTGCCTTAAGGGCAAAAGAACTTGCAGAGAAGATGCTTTTACAGAAGGACTTTGGTGGGGCAAGAATGCTTGCAATGAAGGCTCTAGAATTATATCCCAATCTTGATGGCCTTCCTCGATTTCTGGCAACTATTGAGGTGTATATCTCAGCGGATAAAATGGTTAATGGAGAAGTTGACTGGTACAGGATCCTTGGTGTGCAACCCTTGGCTGATGAAGAAACAATTCGAAGACGATATAGGAAACTAGCTCTTACTCTGCACCCTGATAAAAATAAATCTGTAGGTGCAGATGGGGCGTTTAACCTTATCTCACAGGCTTGGAGTTTATTATCTGATAAGGACAAGAGGACCACATATGACCAAAAGTACAACTTATGGCGAACATATCATGGAAATCCTGGTGGGAAACCATCTGCGCCAGTTACTCAGAATGGTTTATATAGTAGTTTATTCAGTCCTGTGTTGTTGAAACCCACATTTTGGACCATTTGCAACTTCTGTCAGACGAAGTTTGAGTACCATAATGTTTATATTAACTCTGATCTTATCTGTACATGTTGCCATAAGTCATTTGTGGCTTCTGAGACATCACCTCCACCTGTATACAGAAATGGTTCGTCCTCTTCAAGAATTTCTCAGATGAGGCAACATAACTTCAACTTAAGCAGAATGGAAAGAAGTAATGGAAATCATGTTCCCGGAAGGACACCAATGTCTGCTATCAATTCAGCACGTGGGTCAGGTCCTTTCTCCATGCCTAGTAGCACTTTCCGCATACCAACATCAGCTTCTAGTGCTGCAGAAACTCTTGGTGCATTTAGGATGTCTTCTGAAAATTTGAAGAGAATGCATGAAGATTCAACCGTGTCTTTAGAGGATGCCCATATTGGGAAAATTCATGCTGCTGGTTCAGTTTTTCAGTCCTCTGGTTTTGGTTCATATTCTATTATGAAAGGTGACAAGCCTAGGAAGAGAAGGTCCACTGATGAACATAAAGTAGGTAGAGATGGAAGAGATATGGAAAGCAAAACAGTATCTCAAACTGAAGGAACAAACTTGGCTAATGAATTTGGGTCAGGAAGGGTTAGTGCTGCTGGAAATTACAAACGCAATGGTGTTAGGGACATATCACAGCTTCAAATGAAGCACCTATTGATGGAAAAGGCTCGGAAGGAGATTCTTAAAAATCTTGGTGAGTTGAAAGCTTCTTCTGCATTAAAAAGTCTAAACAAGTCAAAGAATACTGACACAGAAATCAGTGAGAAGGGGAAAAGTTGTGATATTAATGGTTTAAAGCCTGGTGCACTAGAATTTGTTGATTCTAAGGCTGCCGGAAAGAAGTGTTTTTCTGTTCATCCAGATCCTGAGCTTCCTGGTTCTCTCTCTATGAATGTTCCAGACCCAGATTTCCATGATTTTGATGGAGACCGTATTGAAAATGCTTTTGGTGAGAACCAGGTGTGGGCTGCATATGACAATGATGATGGCATGCCCCGGTTCTATTGTTTAATCCATGATGTAATCTCAAAGAATCCTTTCAATATGAGGATAAGCTGGTTGAATACCAAAAGCAATGATGAATTGGCCCCAATAAAGTGGATCAGTTCTGGCTTTCTTAAGACCAGTGGAGAGTTCAGAATAGGAAAGCGTGTGTATTATAGCACTCTTAACTCCTTTTCACACAGGGTGAAATGGACAAAGGGTTCGAGAGGGGTTGTCCATATATATCCGAAGAAAGGTGATGTATGGGCACTGTATCGGAACTGGTCCCTTGACTGGAATGAATTCACTAAAGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAAGACTACAGTGAAGAGCAAGGGGTGAATGTTGCCCCACTTGTCAAGCTTGCAGGTTTCAAGACGGTATTTCGGCAGAATGTTGATCCAAGAAAGGTCAGGAATATTTCAAAAGCGCAGATGTTTCGTTTCTCACACCAGGTACCTTCATACTTGCTTACTGGTGAAGAGGGTCCCAATGCTCCTAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACGCCGATGGAGCTTCTTCAGGTGTTAGCTCAAGATCTGGAGCAAGATATAATAATGAAAACTGAAAAATCTGTTAAAGATGAATTGCAGCACAAAGAGAATTCCAGGGAGGAGGTTTCACTTAAGGGGTGCCAGTCAACCAAGGAAGAAGGTTCTGATGCAGGATTAGGAGAGAAGAGAAGCAAGCCTGAGATTTTGTTTGTATATAAGCGGAGACGTCTGGGGGAAAAGAGAGCTGTGAAGTGTTAA 2319 0.4166 MECKKDGALRAKELAEKMLLQKDFGGARMLAMKALELYPNLDGLPRFLATIEVYISADKMVNGEVDWYRILGVQPLADEETIRRRYRKLALTLHPDKNKSVGADGAFNLISQAWSLLSDKDKRTTYDQKYNLWRTYHGNPGGKPSAPVTQNGLYSSLFSPVLLKPTFWTICNFCQTKFEYHNVYINSDLICTCCHKSFVASETSPPPVYRNGSSSSRISQMRQHNFNLSRMERSNGNHVPGRTPMSAINSARGSGPFSMPSSTFRIPTSASSAAETLGAFRMSSENLKRMHEDSTVSLEDAHIGKIHAAGSVFQSSGFGSYSIMKGDKPRKRRSTDEHKVGRDGRDMESKTVSQTEGTNLANEFGSGRVSAAGNYKRNGVRDISQLQMKHLLMEKARKEILKNLGELKASSALKSLNKSKNTDTEISEKGKSCDINGLKPGALEFVDSKAAGKKCFSVHPDPELPGSLSMNVPDPDFHDFDGDRIENAFGENQVWAAYDNDDGMPRFYCLIHDVISKNPFNMRISWLNTKSNDELAPIKWISSGFLKTSGEFRIGKRVYYSTLNSFSHRVKWTKGSRGVVHIYPKKGDVWALYRNWSLDWNEFTKDEIIQKYDMVEVLEDYSEEQGVNVAPLVKLAGFKTVFRQNVDPRKVRNISKAQMFRFSHQVPSYLLTGEEGPNAPKGCLELDPAATPMELLQVLAQDLEQDIIMKTEKSVKDELQHKENSREEVSLKGCQSTKEEGSDAGLGEKRSKPEILFVYKRRRLGEKRAVKC* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0662 772 PANTHER BNAC03G44070D PROTEIN 1 721 - -
Vra5g0662 772 SUPERFAMILY Chaperone J-domain 63 145 IPR036869 -
Vra5g0662 772 SMART dnaj_3 65 122 IPR001623 -
Vra5g0662 772 MobiDBLite consensus disorder prediction 718 748 - -
Vra5g0662 772 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Vra5g0662 772 MobiDBLite consensus disorder prediction 325 350 - -
Vra5g0662 772 MobiDBLite consensus disorder prediction 351 365 - -
Vra5g0662 772 Gene3D DnaJ domain 64 166 IPR036869 -
Vra5g0662 772 MobiDBLite consensus disorder prediction 320 366 - -
Vra5g0662 772 CDD DnaJ 66 119 IPR001623 -
Vra5g0662 772 Pfam DnaJ domain 66 127 IPR001623 -
Vra5g0662 772 Pfam Domain of unknown function (DUF3444) 469 675 IPR024593 -
Vra5g0662 772 PANTHER HEAT SHOCK PROTEIN-LIKE 1 721 - -
Vra5g0662 772 MobiDBLite consensus disorder prediction 718 734 - -
Vra5g0662 772 PRINTS DnaJ domain signature 68 86 IPR001623 -
Vra5g0662 772 PRINTS DnaJ domain signature 86 101 IPR001623 -
Vra5g0662 772 PRINTS DnaJ domain signature 102 122 IPR001623 -
Vra5g0662 772 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0662 Vra-Chr5 10408076 10412223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0662 8 208 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.654 8.26e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0662 - - gmx:100797672 1221.07