Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0661 ATGGTGAGAGTGCATGAGAAGGTGAAGGAGTTTGTGAGGCACAGATGGGTGGTGTTTGTGTGCGCGATGTGGGACATGTCATTCGCAGGCACCTCATACATGTTCGGGAGCATATCGCCGGTGATAAAGAGCAGCATGGGTTTCAATCAGAAGCAGGTGGCGTTCTTGAGCGTCGCCAAGGATTTGGGTGACAACGTTGGTCTTCTTGCCGGCAAATTCAGCCAGCTCTACCCCATTTCCACTCTCATTCTTGTTGGAGTCTTCCAGAATGTTCTTGGTTATGGCCTTGTTTGGCTCGTCGTCACGCATCGCCTTCCCGCTTTCCCTCTTTGGCTGCTATGCATTCTAATCTTTGTGGGACAAAATGGGTCAACATATTACAACACAGCTGCACTGGTTTCCAGCGTGCAAAGTTTCCCCGAGAGCAGAGGCCACGTGGTGGGGATTTTGAAGGGCTTCGTTGGCCTAAGCGGTGCAATCTGGACTCAAATCATAGCCATGATGAAACTCCCTGATCAAGCCTCTCTCATTTTCATCATTGCAGTTGGACCTGCAATGGTTTCATTAGCCCTGATCTTCATCATCAGACCCGTTCACAGTTATAAACAATCTAGAGCCTCTGATGAATCAGGTTTCATGTTCATCTACAGCATTTGCCTTCTCTTGGCTGCTTACATGACGGGAGTTTTGTTGCTTGAAAACGTGCTTCATTTGGACCAAACCATCATCTCAATGTTTGCATTCATTCTGATCATTCTCATATTGCTTCCAATCATAGTTCCCATTCTATTGGTTTTCTTCTCTGGACCCCAGAGTGCTGACCAAGAAGCCCTCTTGGAACCACCACTGCTACAAGGGACAAAGTCTAAGAATGTGATTGGGGAGAGTAGTAGTACTGCCAGAGTAACCAAACACGTTGAAAATGAGAAGAGCATTCCCCCTAACCTAGAGGTGCTTCCTCTGTCCGAAGGGCCAAGGGACATGTTTCAGATTCAAGCTAGGCTTTGGCAAGCTCTGACCAACGCTTTGAGGAAAATCAACCTAAAAAATGGGCCCCGTAGAGGAGAGGATTTCACCTTATCACAAGCAATGGCCCAGGGTGACTTTTGGGTGATGTTTTTCTCTCTAGTCATGGGCGCTGGGTCGGGCTTGACAATCATAAATAACATGGGCCAGATATGTCAATCATTGGGAGACAACAACGTCAATGTCTATGTCTCAGTTATCAGCATATCCAACTTCCTTGGTCGTGTTGGTGGTGGCTACTTCTCAGAGGTTATAGTAAGAAATTTTGGGTATCCGAGACTTGTAGCATTGGCAGTGATTCAAGCGATGATGTCTTTGGGACTCTTCTACTACATGGTGGGATTGGTTGGACAAGTTTACGTGGTGGGGATATTGAACGGCTTTGGGTACGGTGCTCATTGGTCAATTGCTCTAGCAGCAGCTTCAGAACTATTTGGCGTGAAAAACTTTGGAACTTTGTACAATTTTCTGACTATGGCTAGCCCAGCGGGGTCTCTCTTCTTGTCTGGATTTGTAGCAAGTACAATATATGACTACTATGCAGAGCAACAGGCAAAGCACCGAATGATGCAAACTTTTGAAGTCTCCAACTTAGCAATTTCTTACCACGTAATAGCAAATAACAGTGAGGTGCTTCTTTGCGAGGGAAACATTTGCTTCTCCCTCACTTGTGGAATATTGGCACTGGTTTGCTTGTTTGCAGCTTCTTTGAGCTTGGTCATCGCTCATAGAACAAGAAGGTTCTATGCACAACTTTATGAGGAGTCTCGAAGGTAA 1803 0.4609 MVRVHEKVKEFVRHRWVVFVCAMWDMSFAGTSYMFGSISPVIKSSMGFNQKQVAFLSVAKDLGDNVGLLAGKFSQLYPISTLILVGVFQNVLGYGLVWLVVTHRLPAFPLWLLCILIFVGQNGSTYYNTAALVSSVQSFPESRGHVVGILKGFVGLSGAIWTQIIAMMKLPDQASLIFIIAVGPAMVSLALIFIIRPVHSYKQSRASDESGFMFIYSICLLLAAYMTGVLLLENVLHLDQTIISMFAFILIILILLPIIVPILLVFFSGPQSADQEALLEPPLLQGTKSKNVIGESSSTARVTKHVENEKSIPPNLEVLPLSEGPRDMFQIQARLWQALTNALRKINLKNGPRRGEDFTLSQAMAQGDFWVMFFSLVMGAGSGLTIINNMGQICQSLGDNNVNVYVSVISISNFLGRVGGGYFSEVIVRNFGYPRLVALAVIQAMMSLGLFYYMVGLVGQVYVVGILNGFGYGAHWSIALAAASELFGVKNFGTLYNFLTMASPAGSLFLSGFVASTIYDYYAEQQAKHRMMQTFEVSNLAISYHVIANNSEVLLCEGNICFSLTCGILALVCLFAASLSLVIAHRTRRFYAQLYEESRR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0661 600 CDD MFS_Mch1p_like 14 577 - -
Vra5g0661 600 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 599 - -
Vra5g0661 600 Gene3D MFS general substrate transporter like domains 8 207 IPR036259 -
Vra5g0661 600 SUPERFAMILY MFS general substrate transporter 212 589 IPR036259 -
Vra5g0661 600 SUPERFAMILY MFS general substrate transporter 8 198 IPR036259 -
Vra5g0661 600 Pfam Nodulin-like 15 262 IPR010658 -
Vra5g0661 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0661 Vra-Chr5 10392428 10395884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0661 5 599 Nodulin-like Gene Family AT5G14120 48.571 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0661 - - vun:114196253 1080.09