Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0653 ATGGAGCTTTTCGATTTCACTAGCGGCGACCACAACCTTAATGTGCCACAGCCCCAGCCACAACATAACAACCACCACCAGGACGCTCGCTTAGGCCTCGGAATCGACCTTAATGAGATCCCTTTGCCTTCCGCCGAAACCCTACTGGACTCTGTCACCAACATCGTCTGCACTTATGATGAGAACCCCGGACCGCCGTCGGGAGCCCCCACTGCCCTCCCTAACGATGGCCTCGCTCCTGGCGCTGCCTGCTCAAAGCCCTGCCCCGCCACCATTGGGAGCCACCACCACCTCATCTTGTGCGACAATTGGGAGTGCGGCTTCCACCTCGCCTGCGAGTGCGTCGCCTCTGGAGTGAAGAGCAAGCGGTGGTTGTTGGAGTGA 384 0.5938 MELFDFTSGDHNLNVPQPQPQHNNHHQDARLGLGIDLNEIPLPSAETLLDSVTNIVCTYDENPGPPSGAPTALPNDGLAPGAACSKPCPATIGSHHHLILCDNWECGFHLACECVASGVKSKRWLLE* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0653 127 MobiDBLite consensus disorder prediction 1 27 - -
Vra5g0653 127 MobiDBLite consensus disorder prediction 10 26 - -
Vra5g0653 127 PANTHER OS02G0192300 PROTEIN 32 126 - -
Vra5g0653 127 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 32 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0653 Vra-Chr5 10171977 10172360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0653 27 126 C2H2 Transcription Factor Family AT3G01460 31.008 6.06e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0653 K22768 - vra:106760307 263.077