Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g0651 | ATGGAGAAACACCAAGTTATGCTCCATACCGCATCTACATCAACAGCTTTATCATCTCATTTTAAAGATGTTGAGAAACAGGTTTCAGAGATATCATCTCAGAACCAAAGTGACAAGGAAGCTAAGCACCACCGATATGCATTTCAAACCAGAAGCGCTGTTGATGTTCTGGATGATGGCTACCAGTGGAGAAAATATGGGAAAAAGATAGTCAAAAACAATACTTTTCCAAGAAGTTACTACAAGTGTGCTCATCGAGAGTGCAATGTTAAGAAACAAATCCAGCGCCATTCCAGCGATGAAGAGATCGTGGTCACAACCTACGAAGGGACGCATACACACCCTGTGGATAAGTCAGTGGAAACCTTCGACCAGATCTTGGGCAACCTACTCATAGGCAACCTATTCAATAATGCACCTCCCACATTGGAATAG | 435 | 0.4253 | MEKHQVMLHTASTSTALSSHFKDVEKQVSEISSQNQSDKEAKHHRYAFQTRSAVDVLDDGYQWRKYGKKIVKNNTFPRSYYKCAHRECNVKKQIQRHSSDEEIVVTTYEGTHTHPVDKSVETFDQILGNLLIGNLFNNAPPTLE* | 145 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g0651 | 144 | Pfam | WRKY DNA -binding domain | 58 | 115 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0651 | 144 | SMART | WRKY_cls | 57 | 116 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0651 | 144 | PANTHER | WRKY FAMILY TRANSCRIPTION FACTOR | 1 | 133 | - | - | |
Vra5g0651 | 144 | SUPERFAMILY | WRKY DNA-binding domain | 49 | 116 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0651 | 144 | ProSiteProfiles | WRKY domain profile. | 52 | 117 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0651 | 144 | Gene3D | WRKY domain | 41 | 117 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0651 | 144 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 133 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g0651 | Vra-Chr5 | 10149676 | 10153071 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g0651 | 45 | 136 | WRKY Transcription Factor Family | AT5G13080 | 65.217 | 6.84e-44 | 139 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vra5g0651 | WRKY | 2.5e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g0651 | - | - | var:108331379 | 243.432 |