Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0602 ATGGATCTTGAATCCAGGAAGTGTTGGGATACCTCAAAGAAGGACTCTTGGAAGACTGTTATGCTCTTGGCCTACCAAAGCCTTGGTGTGGTATATGGGGACTTGAGCATTTCTCCTTTGTATGTGTTCACGAGCACATTTGCCGAAGATATTGAACATTCAGAGACCAATGAAGAGATTTTTGGTACCCTCTCTTTTGTATTCTGGACTCTGACACTGGTGCCACTCTTCAAATACGTTTTTGTGGTTCTTAGAGCTGATGATAATGGAGAAGGTGGTACGTTTGCTCTATATTCCTTGATTTGTAGGCATGCCAAAGTCAGTCTCCTACCAAATCGACAACATGCGGATGAAGCGCTTTCTACATATAAGATGGAGGAGCCTCCAGAAAAAGATACTTCTAGAGTTAAGATGGTACTTGAGAAATATAAGGGTTTGCATACGGCTCTCCTAATCGTGGTTCTTCTTGGCACTTGTATGGTAATAGGAGATGGACTTCTTACTCCAGCTATGTCTGTTTTCTCGGCAGTATCTGGTCTTGAGCTATCTATGACCAAGAAACACCACCAGTATGCTGTGATTCCCATCACTTGCTTCATACTGGTTTGTTTGTTCGCACTGCAACACTATGGTACACATAGGGTGGGATTCCTTTTTGCTCCAATTGTGTTAGCATGGCTGTTGTGCATCAGCACACTTGGTCTATATAATATATTCAAATGGAATCCACATGTATATAAAGCTCTTTCGCCATATTATATGTTCAAGTTTTTGAAGAAGACAAGGATAAGTGGATGGATGTCTTTGGGGGGAATATTGCTGTGCATAACAGGCTCAGAAGCTACGTTTGCTGATCTTGGCCATTTCTCATATATGGCCATTCAGACTGCATTCACCTTTCTGGTATATCCTGCGCTTATATTAGGATATATGGGACAAGCTGCGTATTTGTCACATCATCATGATTCTGATCTCCAAATCAGTTTCTTTGTCTCAGTTCCAGAAAGTGTGAGGTGGCCAGTGCTTATCCTAGCCATTCTAGCTTCAGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTTTCTATCATAAACCAGAGCCAATCTCTAGGTTGCTTCCCAAGAGTCAAGGTTGTCCATACATCTGACAAGATACATGGTCAGGTCTACATTCCTGAGATTAATTGGTTACTCATGATCCTCTGTATTGCTGTGGCCATCGGATTTAGGGACATAAAACACATGGGAAATGCTTCAGGATTAGCAGTGATGACTGTGATGCTGGTAACGACATGCCTTACTTCGCTGGTAATCGTAGTTTGCTGGCACAAACCCCCCATAGTAGCACTCTGTTTCCTGTTGTTCTTTGGCTCTATTGAACTGCTGTATTTCTCAGCTTCCCTCACAAAGTTTTGTGAGGGTGCCTGGTTACCAATCCTTCTGGCACTCTTCCTCATGATTATAATGTTCCTTTGGCACTATGCAACCATCAGAAAATATGAATATGACCTTCACAACAAGGTATCACTAGATTGGCTTCTAGCCTTAGGTCCTAGCTTAGGAATTGCTAGAGTTCCAGGAATAGGACTAGTGTTCACTGACCTCACAGCTGGTATCCCAGCAAACTTCTCCCGCTTTGTGACCAACCTCCCTGCATATCATCGCATCCTTGTTTTTGTGTGTGTGAAATCAGTGCCTGTCCCTCATGTTCCTGCTGCTGAGAGGTATCTTGTGGGGCGTGTAGGACCTTCTGCTCATCGGTCCTACAGATGTATAGTCAGATATGGATATCGTGATGTTCATCAAGATGTTGATTCCTTTGAGTCAGAACTAGTAGCAAGGCTTGCAGATTTCATCCAATACGATTGGTACAGGAGTAGGAGGAGCAGCATGAGCGTTGAGGATGATGTCTCAAACTCTAATGAATCATCCAGTCACAGACTAACTGTGATTGGAACAACTGGTTTCTCCATCCAGCCAGGATATGAGAGTGGTGGTGAGAGTGTGCAGCAAGCCAGTGTCTCTGTTGGGTTCCCTACAGTTCAAAGTGTGAGTGATGTTATTGAGATGGAACCAACAGTGAGTGAGAGGAGAGTGAGGTTTGCTATTGACTATGAGCCTGAGAGCGATGCAAGGTCTGAGGTAGGACTGCAGATGCAGGAAGAACTGGAAGATCTTTATGCTGCTCAAGAAGCTGGGATTGCCTTCATTCTTGGACATTCTCATGTAAGAGCAAAGCAAGGCTCATCTGTCCTGAAGAAATTGGCACTAAACTACGGCTACAATTTCTTGAGAAGGAATTGTAGAGGCCCTGATGTAGCACTTAAGGTTCCCCCAGTTTCTCTTTTGGAGGTTGGCATGGTTTACATTGTGTAG 2376 0.4377 MDLESRKCWDTSKKDSWKTVMLLAYQSLGVVYGDLSISPLYVFTSTFAEDIEHSETNEEIFGTLSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSTYKMEEPPEKDTSRVKMVLEKYKGLHTALLIVVLLGTCMVIGDGLLTPAMSVFSAVSGLELSMTKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLAWLLCISTLGLYNIFKWNPHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEATFADLGHFSYMAIQTAFTFLVYPALILGYMGQAAYLSHHHDSDLQISFFVSVPESVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWLLMILCIAVAIGFRDIKHMGNASGLAVMTVMLVTTCLTSLVIVVCWHKPPIVALCFLLFFGSIELLYFSASLTKFCEGAWLPILLALFLMIIMFLWHYATIRKYEYDLHNKVSLDWLLALGPSLGIARVPGIGLVFTDLTAGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVPAAERYLVGRVGPSAHRSYRCIVRYGYRDVHQDVDSFESELVARLADFIQYDWYRSRRSSMSVEDDVSNSNESSSHRLTVIGTTGFSIQPGYESGGESVQQASVSVGFPTVQSVSDVIEMEPTVSERRVRFAIDYEPESDARSEVGLQMQEELEDLYAAQEAGIAFILGHSHVRAKQGSSVLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0602 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0602 791 PANTHER POTASSIUM TRANSPORTER 2 1 791 - -
Vra5g0602 791 TIGRFAM kup: potassium uptake protein 23 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0602 791 Pfam K+ potassium transporter 25 599 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0602 Vra-Chr5 8874545 8880793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0602 1 791 Inorganic Solute Cotransporters AT2G40540 77.764 0.0 1267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0602 K03549 - gmx:100806122 1492.25