Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g0573 | ATGCTGCCGGATTCCTCCGAGCAGGACCTCGACGATCCTGACATGGAATTCGTCGAGGTTGATCCCTCTGGTCGTTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAATTGGAAGGTATTGAAGTGGCTTGGAATCAGATTAAGCTGGCGGATGTTTTGCGTAACTCTGAAGATTTCGAGCGACTTTATTCGGAGGTTCATTTACTCAAGACTTTGAAGCATAAGAATATAATTAAGTTTTATAACTCATGGATTGACTCCAAGAGCGAGAACATCAACTTCATTACTGAAATTTTCACCTCAGGAACGTTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTGTGAAGAAATGGTCTAAGCAGATTCTGGAAGGCCTTCACTATCTTCACAGTAATAATCCTCCCATCATTCATCGTGACCTGAAGTGCGATAACATTTTTGTCAATGGGAATCAAGGGGAGGTAAAAATTGGTGATTTAGGATTGGCGGCTATCCTCCAGCAGGCCAATTCAGCTCACAGTGTCATAGGAACTCCGGAATTCATGGCCCCAGAACTTTACGAAGAGGAATACAACGAGCTTGTTGACATCTATGCTTTTGGTATGTGCTTGCTAGAGTTGGTAACAGTTGAGTACCCGTATGTTGAATGTGCCAATGCCGCTCAAATATACAAGAAAGTTACATCTGGAATAAAGCCAGCATCATTGGCAAAAGTGACAGATCCCGAAGTTAAAGCATTTATTGAAAAGTGTATTGCTCATGTATCTGAACGGTTATCTGCGAAGGACCTCTTGATGGATCCCTTCCTTCAGTCAGATTATGATAATGAAAGTGTAGGCCGATCTTCAAAAGCTCAAACCCATCATTTAGCTATTGTTGTGGATACTTCTTCTGAAGCAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAGAGATAATAATACAATATTTTTAAAATTGAGAATTGCAGATTCCTCAGGTCATATTCGCAATATCCACTTTCCTTTTGATATCGAAGCAGACACTTCAACCTCTGTTGCCAGTGAAATGGTTGAGGAGTTGGAACTAACTGATCAAGATGTTACAACTATTGCTAGGATGATTGACTCTGAAATTCGGTTTCACATTCCTAGTTGGAACGTCAGTGAACTTCCTGTTGACAGTTATAGTCAAGATTCAGGCTATACCTCTGAAAGTAGGCCAGAGGCCTCTCCTATGAAACACGATTCTGTTACTTCTCCTGGCAGTCTTGCATTAGAAATATTACCTTCAGGTCGAAAGTTCTGGTCTGACTCGCCAAAGGGAGTTGGTGGAAACTCTCCATATCGTGCTGGTAGTTCAAACTTTTGTTCTGCTGCAGATGCAAACGCTGAGGATGGTAGTTTGGCCGCGAATGGTGATATTTCAGCAGATGATCGTGTTGGTGATTGTAGTGATGAGAAGGAGTGTGATGAGATTGTTGATTCCCCTTCCAGTGAAAAAAATATTAAATCAGGTGCAACCAGTGAAAAATCTGCTGTGAATGTAATATCTGCAAGCGTAAAAGATTCAGAAGCAGAATACATCAATCTCATAGCAAAAAAACTGGAGAATTTGTTGGTTAAACAAAGAGAGGAGTTAGATGAACTAAAGAGGAAGCACAAATTAGCTGTCTCGGATCTTTTGAAGGAACTTTCTCCAGAAATTAGCCAGAAGGTTCTAAATATATGCAACCTACAGATGCCTGGCGGTGAAGTGCAGGGAGAGAGTCGCGCTTCATTCATCTAA | 1812 | 0.4161 | MLPDSSEQDLDDPDMEFVEVDPSGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKLADVLRNSEDFERLYSEVHLLKTLKHKNIIKFYNSWIDSKSENINFITEIFTSGTLRQYRKKHKHVDLRAVKKWSKQILEGLHYLHSNNPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVTDPEVKAFIEKCIAHVSERLSAKDLLMDPFLQSDYDNESVGRSSKAQTHHLAIVVDTSSEASREFTVEGQRRDNNTIFLKLRIADSSGHIRNIHFPFDIEADTSTSVASEMVEELELTDQDVTTIARMIDSEIRFHIPSWNVSELPVDSYSQDSGYTSESRPEASPMKHDSVTSPGSLALEILPSGRKFWSDSPKGVGGNSPYRAGSSNFCSAADANAEDGSLAANGDISADDRVGDCSDEKECDEIVDSPSSEKNIKSGATSEKSAVNVISASVKDSEAEYINLIAKKLENLLVKQREELDELKRKHKLAVSDLLKELSPEISQKVLNICNLQMPGGEVQGESRASFI* | 604 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g0573 | 603 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 6 | 590 | - | - | |
Vra5g0573 | 603 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 333 | 387 | IPR024678 | GO:0004674|GO:0005524 | |
Vra5g0573 | 603 | Pfam | Protein kinase domain | 30 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g0573 | 603 | SMART | serkin_6 | 27 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g0573 | 603 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-RELATED | 6 | 590 | - | - | |
Vra5g0573 | 603 | MobiDBLite | consensus disorder prediction | 402 | 428 | - | - | |
Vra5g0573 | 603 | Coils | Coil | 541 | 568 | - | - | |
Vra5g0573 | 603 | CDD | STKc_WNK | 25 | 285 | - | - | |
Vra5g0573 | 603 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 292 | - | - | |
Vra5g0573 | 603 | SUPERFAMILY | Protein kinase-like (PK-like) | 29 | 286 | IPR011009 | - | |
Vra5g0573 | 603 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 151 | 163 | IPR008271 | GO:0004672|GO:0006468 | |
Vra5g0573 | 603 | Gene3D | - | 329 | 411 | - | - | |
Vra5g0573 | 603 | ProSiteProfiles | Protein kinase domain profile. | 27 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g0573 | 603 | Gene3D | Phosphorylase Kinase; domain 1 | 11 | 108 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g0573 | Vra-Chr5 | 7461295 | 7465399 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g0573 | 17 | 394 | MAP Kinase Kinase Kinase | AT3G22420 | 53.547 | 4.00e-163 | 477 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | WNK_NRBP | Vra5g0573 | Pkinase | 5.4e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g0573 | K08867 | - | gmx:100301899 | 917.531 |