Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0553 ATGGCAGAAGTTGGAAAACGCTTCCTAGAGTATCAACTTATCGTCAATAATCCCAATCCTGTCTGGAACAGTGAAAACTTATTAAGATTCAATCTTCCACAATTTACCCTTCTATTGCTTTGCATGATCGCTCTCACCCGCATTATACACTACATCCTAAGACCTTTCAATCAACCACATTTCGTTGCTGAGTTTCTTGCAGGTTTACTGGTATGTCCACAACTGGTGGCAGGAACAATAGCATTTACATTTGTGGCACCTCCAAAAGCACTTCTTGGTATAGAGACCATGGCACATCTAGGTCTCATCTACAATGTCTTCCTGACTGGCTTGGAGATGAACCTAGACGCTATCCTGCTAGCAAGAAAAAAGGCTACAACCATTGCTATGGTTAGCACCATCATTCCAATGTTGTTAGGAGCTGCAATATATTCCATGGCTCAATCTCTCTACAAGGGTCCTAACCTTGACATGTCACTTTACAACACACCTAGTGCATATTTATTCTGGGCTTTGGTTCTCAGTGTCACAAACTTCCCTGTCCTTGCTAACATTCTTGCTGATCTTAAGATCCTCTACACAGAGCTAGGTAGAGTGGCTGTAACTGCAGCCACAATAAGCGACTTCTACAATTGGGCAATGTTTGTGTTGCTAATTCCATTTGCTTGTCATAGTCAAAGACCTTTTCTCTCAGTGATATTAACCATTTTCTTTATGCTCTTCTGCTACTTGGTGTTGCGCCCATTCCTTACCAAGTTGTTGAATAAGGAAACAGAAAATAATGAGTGGGACAATTACAAGTTATCGTATGTTCTTGTAGGTGTTTTGGCTTTTGCACAAGTGACTGAAATGCTAGGTACACATTCCATTGTTGGGGCGTTGGTGTATGGATTGATGCTTCCTCGTGGAAAATTTGCTGACATGTTGATGGAAAGGTCAGATGATCTTGTCTCCATGTACCTGGAACCGTTGTTCTTTGTTGGCTGTGGCATAAGATTCGACTTTTCTAGTTTTAAACTGCACAAAGTTCTTAACCATGTTCTGTGGGAATCTTGGTTGACCGTGGACACAGGTTACCGTCTGAGATGA 1089 0.4169 MAEVGKRFLEYQLIVNNPNPVWNSENLLRFNLPQFTLLLLCMIALTRIIHYILRPFNQPHFVAEFLAGLLVCPQLVAGTIAFTFVAPPKALLGIETMAHLGLIYNVFLTGLEMNLDAILLARKKATTIAMVSTIIPMLLGAAIYSMAQSLYKGPNLDMSLYNTPSAYLFWALVLSVTNFPVLANILADLKILYTELGRVAVTAATISDFYNWAMFVLLIPFACHSQRPFLSVILTIFFMLFCYLVLRPFLTKLLNKETENNEWDNYKLSYVLVGVLAFAQVTEMLGTHSIVGALVYGLMLPRGKFADMLMERSDDLVSMYLEPLFFVGCGIRFDFSSFKLHKVLNHVLWESWLTVDTGYRLR* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0553 362 Gene3D - 33 351 IPR038770 -
Vra5g0553 362 Pfam Sodium/hydrogen exchanger family 41 340 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra5g0553 362 PANTHER CATION/H + ANTIPORTER 20 348 - -
Vra5g0553 362 PANTHER CATION/H+ EXCHANGER 3 20 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0553 Vra-Chr5 7213262 7214447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0553 19 339 Antiporter Super Family AT2G13620 35.276 1.50e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0553 - - vra:106760256 723.005