Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0519 ATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCTTCAAGTGGTAAATTGACTGAGAAGTCTGATGCATATTCTTTTGGAATCGTGCTTTTGGAGCTAATTACCGGGCGGAAGCCAGTAGATGTATCCCAACCTTTGGGAGATGAAAGCCTGGTTGAATGGGCTCGGCCTTTACTAAGTCATGCAATTGATACTGAGGAATTCAGTAGTTTGGCAAATCAAAGCCTAGAAAAGAATTACATTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCAGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTTCTGATCTAACTAATGGAATGCAACTTGGGGAAAGTGAGGTGTTTGACTCTGCACAACAATCTGAAGAAATAAGATTATTTCACAGCTCTACAATCGTTTCTTCAACAGCATGGTGTTGGATTTTATCTCAATGCCACACAAGAGAAATGGAAAAATTGGCGCATGTATGA 525 0.4171 MGTFGYVAPEYASSGKLTEKSDAYSFGIVLLELITGRKPVDVSQPLGDESLVEWARPLLSHAIDTEEFSSLANQSLEKNYIESELYCMIEVAAACVRHSASKRPRMGQVVRAFDSLGGSDLTNGMQLGESEVFDSAQQSEEIRLFHSSTIVSSTAWCWILSQCHTREMEKLAHV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0519 174 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 149 - -
Vra5g0519 174 PANTHER BNACNNG34790D PROTEIN 1 149 - -
Vra5g0519 174 SUPERFAMILY Protein kinase-like (PK-like) 1 119 IPR011009 -
Vra5g0519 174 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g0519 174 Pfam Protein tyrosine and serine/threonine kinase 6 112 IPR001245 GO:0004672|GO:0006468
Vra5g0519 174 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0519 Vra-Chr5 6445392 6448697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0519 1 146 Trihelix Transcription Factor Family AT5G38560 68.027 1.43e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Vra5g0519 PK_Tyr_Ser-Thr 2.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0519 - - vra:106760776 348.206