Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0518 ATGGGAAAGTTGAAGTCAAATTTCATTTCTTCAGATTTGATTCAACGTGGTATTCTACTTTTCCTACTTCTTTTATCACAGTATTCCATTGAAGCAGCATCTTGTGCCTCGAGAGTGAAGTTCCTTCCAGGATTCGAGGGACCCCTTCCTTTTCTTCTTGAAACTGGGTATGTGGGAGTGGGAGAATCAGAAGATGTCCAAACATTTTATTACTTCATTGAGTCAGATAACAATCCCAAAGAAGATCCTCTCCTGCTTTGGCTATCCGGTGGCCATGGTTGTTCATCCCTAACTGCCTTTTTACTTGAAATAGGTCCAGTTGCAATAAAACAGGAGGAATACAATGGAGGTCCACCCAACTTGATCCTCAGGAATCAATCATGGAACAAGGTTAGTAGCATTATATATGTAGACTTGCCTGTTTCAACAGGCTTTAGTTATGCCAGAACAGAACTTGCTGCTCAAAGAAGTGATAAGTTGTTGGCTGATCAAGCCCATGAATTTCTAAGGAAGTGGTTAATTGATCATCCAATTTTTTTGTCAAACGAAGTTTACATTGCTGGTAGTTCATATTCTGGCATTCCCGTTCCAGTAATTGTTCAAGAAATTGCACAAGCTAACGAAGAAGGGATTCAACCAAAGATAAATCTCCAGGGATACCTTTTGGGGGATCCAGCAACAACTGGAAGGGGAGCAAACTATAGAATCCCTTTTGCTTATGGAATGGCACTTATTTCTGAAGAGCTATATGAGTCACTACAAAAAAATTGTAAAGGAAATTACATCGATGTGGACTCCGAAAATGTATTATGCTATAAAGATATGGAGTCATTCAATAAGCTTGTATCAGGACTTTATAGTTCCAATATTTTGGAGCCGTTGTGTGTGTTCGATGAACTTGAATCTCCTTTGAGAAGATCCCTAATTAAGAAATTTTCTGAAGAGCATTTCTTGAAAACTGATCTCAAAGTGTCAGACGTAACATGTCCGACTTATACANCANTCCTTATGACTTATTGGGCAAATGATGATACTGTTCGAACTGCACTTAATGTCCGCAAGGGAAGTATAGGAACATGGGTTCGTTGTAATCATGATGAAGATTTCAACTTCGATATTCCAAGCAGCGTTGAATATCATGCAAATCTTAGTAAAAAAGGATATCGTTCATTAATATACAATGGTGATCTTGACATGGTGGTTCCTTTCATGGGAACTGAAGACTGGATAAGATCATTAAACTACTCAATTGTTGATGATTGGAGGCCATGGAATTCAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAATAAGATGACATTTACAACTGTGAAGGGTGCGGGCCACAGAGCTCCGACTGACAAATCCGGAGAATGTTTTGACATGTTCAGTAGATGGATATCAAAGAAGGCTTTGTAG 1425 0.3902 MGKLKSNFISSDLIQRGILLFLLLLSQYSIEAASCASRVKFLPGFEGPLPFLLETGYVGVGESEDVQTFYYFIESDNNPKEDPLLLWLSGGHGCSSLTAFLLEIGPVAIKQEEYNGGPPNLILRNQSWNKVSSIIYVDLPVSTGFSYARTELAAQRSDKLLADQAHEFLRKWLIDHPIFLSNEVYIAGSSYSGIPVPVIVQEIAQANEEGIQPKINLQGYLLGDPATTGRGANYRIPFAYGMALISEELYESLQKNCKGNYIDVDSENVLCYKDMESFNKLVSGLYSSNILEPLCVFDELESPLRRSLIKKFSEEHFLKTDLKVSDVTCPTYTXXLMTYWANDDTVRTALNVRKGSIGTWVRCNHDEDFNFDIPSSVEYHANLSKKGYRSLIYNGDLDMVVPFMGTEDWIRSLNYSIVDDWRPWNSNGQVAGYTRTYSNKMTFTTVKGAGHRAPTDKSGECFDMFSRWISKKAL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0518 474 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 16 473 - -
Vra5g0518 474 Pfam Serine carboxypeptidase 43 470 IPR001563 GO:0004185|GO:0006508
Vra5g0518 474 Gene3D alpha/beta hydrolase 33 302 IPR029058 -
Vra5g0518 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 473 IPR001563 GO:0004185|GO:0006508
Vra5g0518 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Vra5g0518 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Vra5g0518 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Vra5g0518 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Vra5g0518 474 SUPERFAMILY alpha/beta-Hydrolases 39 472 IPR029058 -
Vra5g0518 474 Gene3D - 328 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0518 Vra-Chr5 6422564 6480503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0518 33 62 Calmodulin-binding Proteins AT2G22960 70.000 1.53e-07 49.7