Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0517 ATGGGAAAGTTGAACTCAATAGTCATTTCTTCAGATTTGGTTCAGCGTGGTATTCTACTTTTCCTACTTCTTTTATTATACTATTCCATTGAAGCAGCATCTTGTGCCTCCAGAGTGAAGTTCCTTCCAGGATTCGAGGGACCCCTTCCTTTTGTTCTTGAAACTGGGTATGTGGGAGTGGGAGAATCAGAAGATGTCCAAACATTTTATTACTTCATTCAGTCAGATAACAATCCTAAGGAAGATCCTCTCCTGCTTTGGCTAACCGGTGGCCATGGTTGTTCCTCCCTAACTGCCCTTTTACTTGAAATAGGTCCAATTGCAATAAAACAGGAGGAGTACAATGGAGGTCCACCCAACTTGATCTTAACGAATCAATCATGGAACAAGGTTAGTAGCATTATATATGCAGACTTGCCTGTTTCAACAGGCTTTAGTTATGCCAGAACAGAACTTGCTGCTCAAAGAAGTGATACGTTGTTTGTTGATCAAGCCCATGAATTTCTAAGGAAGTGGTTAATTGATCATCCAAAATTTTTGTCAAACGAAGTTTACATTGCTGGTGATTCATATTCTGGCATTCCCGTTCCAGCAATTGTTCTAGAAATTGCACAAGCTAATGAAGAAGGGTTTCAACCAAGGATAAATATCCAGGGATACCTTTTGGGGAATCCACGAACAACTAGAAGGGAAGGAAACTATGCAATCCCTTTTGCTCATGGAATGGCACTTATTTCTGATGAATTATATGAGTCACTGCAAAAAAATTGTAAAGGAAATTACATCGATGTGGACTCCGAAAATGTATTATGCTATAAAGATATGGAGTCATTCAATAAGCTTGTATCAGGACTTTATAAGTACAATATTTTGGAGCCGTTGTGTGTGTTCGATCAACCTGAATCTCTTTCGAGAAGATCCCTAATGAAGAAATTTTCTGAAAAGCATTTCTTGAAAACTGATGTCAAAGTGTTAGACGTGACATGTCCGACTTATACATTACTCCTTTTGGCTTATTGGGCAAATGATGAGAATGTTCAAACTGCACTTAATGTCCGCAAGGGAAGTATAGGAACATGGGTTCGTTGTAATCATAATGAAGGTTTCAAGTTCGAGATTCCAAGCAGCGTTGAATATCATGCAAATCTTAGTAAAAAAGGATATCGTTCATTAATATACAATGGCGATCATGACATGGCGGTTCCTATCTTGGGAACTCAAGAATGGATAAGATCTTTAAACTACTCAATTGTTGATGATTGGAGGCCATGGAATTCAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAATAAGATGACATTTGCAACTGTGAAGGGTGCGGGCCACAGAGCTCCGATTGACAAATCCGGAGAATGTTTTGACATGTACAGTAGATGGATATCAAAGAAGGCTTTGTAG 1425 0.3909 MGKLNSIVISSDLVQRGILLFLLLLLYYSIEAASCASRVKFLPGFEGPLPFVLETGYVGVGESEDVQTFYYFIQSDNNPKEDPLLLWLTGGHGCSSLTALLLEIGPIAIKQEEYNGGPPNLILTNQSWNKVSSIIYADLPVSTGFSYARTELAAQRSDTLFVDQAHEFLRKWLIDHPKFLSNEVYIAGDSYSGIPVPAIVLEIAQANEEGFQPRINIQGYLLGNPRTTRREGNYAIPFAHGMALISDELYESLQKNCKGNYIDVDSENVLCYKDMESFNKLVSGLYKYNILEPLCVFDQPESLSRRSLMKKFSEKHFLKTDVKVLDVTCPTYTLLLLAYWANDENVQTALNVRKGSIGTWVRCNHNEGFKFEIPSSVEYHANLSKKGYRSLIYNGDHDMAVPILGTQEWIRSLNYSIVDDWRPWNSNGQVAGYTRTYSNKMTFATVKGAGHRAPIDKSGECFDMYSRWISKKAL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0517 474 Gene3D - 329 473 - -
Vra5g0517 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Vra5g0517 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Vra5g0517 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Vra5g0517 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Vra5g0517 474 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 16 473 - -
Vra5g0517 474 Pfam Serine carboxypeptidase 43 470 IPR001563 GO:0004185|GO:0006508
Vra5g0517 474 Gene3D alpha/beta hydrolase 33 305 IPR029058 -
Vra5g0517 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 473 IPR001563 GO:0004185|GO:0006508
Vra5g0517 474 SUPERFAMILY alpha/beta-Hydrolases 39 472 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0517 Vra-Chr5 6395125 6406893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0517 33 62 Calmodulin-binding Proteins AT2G22960 70.000 1.34e-07 50.1