Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0514 ATGGGAAAGTTGAACTCAAGTCTCATTTCTTCAGATTTGATTCACCGTGGTATTCTACTTTTCCTACTTCTTTTATCACAGTATTCCATTGAACCAGCATCTTGTGCCTCCAGAGTGAAGTTCCTTCCAGGATTCGAGGGACCCCTTCCTTTTGTTCTTGAAACTGGGTATGTGGGAGTGGGAGAATCAGAAGATGTCCAAACATTTTATTACTTCATTCAGTCAGATAACAATCCCAAAGAAGATCCTCTCCTGCTTTGGCTATCCGGTGGCCATGGTTGTTCATCTCTAACAGCCCTTTTACTTGAAATAGGTCCAGTTGCAATAAAACAGGAGGAGTACATTGGAGGTACACCCAACTTGATCCTCAGGAATCAATCATGGAACAAGGTTAGTAGCATTATATATGCAGACTTGCCTGTTTCAACAGGCTTTAGTTATGCCAGAACAGAACTTGCTGCTCAAAGAAGTGATACGTTGTTTGTTGATCAAGCGCATGAATTTCTAAGGAAGTGGTTAATTGATCATCCAATTTTTTTGTCGAACGAAGTTTACATTACTGGTAGTTCATATTCTGGCATTCCCATTCCAGCAATTGTTCAAGAAATTGCACAAGCTAACGAAGAAGGGATTCAACCAAAGATAAATATCCAGCTTGTATCAGGACTTTATAGTTCCAATATTTTGGAGCCGTTGTGTGTGTTCGATGAACTTGAATCTCCTTTGAGAAGATCCCTAATTAAGAAATTTTCTGAAGAGCATTTCTTGAAAACTGATCTCAAAGTGTCAGACGTAACATGTCCGACTTATACAACAGTCCTTATGACTTATTGGGCAAATGATGATACTGTTCGAACTGCACTTAATGTCCGCAAGGGAAGTATAGGAACATGGACTCGTTGTAATCGTGATAAAGATTACAAGAAGGATATTTCAAGCAGCGTTGAATATCACGCAAATCTTAGTAAAAAAGGATATCGTTCATTAATATACAATGGCGATCATGACTTGTTGGCTCCTTTCTTGGGAACTGAAGAATGGATAAGATCATTAAACTACTCAATTGTTGATGATTGGAGGCCATGGAATTCAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAATCGGATGACATTTGCAACTGTGAAGGGTGCGGGCCACAAAGCTCCGGCTGACAAATCCGGAGAATGTTATGACATGTTCAGGAGATGGATATCAAAGAAGGCTTTGTAG 1239 0.3987 MGKLNSSLISSDLIHRGILLFLLLLSQYSIEPASCASRVKFLPGFEGPLPFVLETGYVGVGESEDVQTFYYFIQSDNNPKEDPLLLWLSGGHGCSSLTALLLEIGPVAIKQEEYIGGTPNLILRNQSWNKVSSIIYADLPVSTGFSYARTELAAQRSDTLFVDQAHEFLRKWLIDHPIFLSNEVYITGSSYSGIPIPAIVQEIAQANEEGIQPKINIQLVSGLYSSNILEPLCVFDELESPLRRSLIKKFSEEHFLKTDLKVSDVTCPTYTTVLMTYWANDDTVRTALNVRKGSIGTWTRCNRDKDYKKDISSSVEYHANLSKKGYRSLIYNGDHDLLAPFLGTEEWIRSLNYSIVDDWRPWNSNGQVAGYTRTYSNRMTFATVKGAGHKAPADKSGECYDMFRRWISKKAL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0514 412 SUPERFAMILY alpha/beta-Hydrolases 39 410 IPR029058 -
Vra5g0514 412 Gene3D alpha/beta hydrolase 33 226 IPR029058 -
Vra5g0514 412 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Vra5g0514 412 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Vra5g0514 412 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Vra5g0514 412 PRINTS Carboxypeptidase C serine protease (S10) family signature 379 392 IPR001563 GO:0004185|GO:0006508
Vra5g0514 412 Pfam Serine carboxypeptidase 257 408 IPR001563 GO:0004185|GO:0006508
Vra5g0514 412 Pfam Serine carboxypeptidase 43 218 IPR001563 GO:0004185|GO:0006508
Vra5g0514 412 Gene3D alpha/beta hydrolase 227 412 IPR029058 -
Vra5g0514 412 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 16 218 - -
Vra5g0514 412 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 220 411 - -
Vra5g0514 412 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 218 IPR001563 GO:0004185|GO:0006508
Vra5g0514 412 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 220 411 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0514 Vra-Chr5 6193798 6207135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0514 33 62 Calmodulin-binding Proteins AT2G22960 70.000 1.03e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0514 K16296 - gmx:100781037 441.425