Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0511 ATGGAGGAAACATTTGTTCCCTTCCGTGGGATTAAGAATGACCTCAAAGCAAGAATAACATGCTACAGACAAGATTGGAGCAGTGGATTCCAAGCAGGAATCAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGCGAGCAACTCGAGAGAAATACTGATGGAACTCTCACTGCTGTGCAAACTCTTGCATCAACTGCACTCTGTGGAGTTATCCACTCAATCATTGGAGGCCAGCCTCTGCTCATACTCGGCGTAGCGGAGCCAACAGTTCTGATGTACACATTCATGTATAACTTTGCTAAGGATCGTGAGGATTTGGGACACAAACTATTCCTACCTTGGACTGGATGGGTGTGTGTTTGGACTGCTCTGTTGCTTTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAATAGATTCACACGTGTTGCTGGCGAATTATTTGGTCTGTTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTGCCTAAGAACCAGAGAGAAGGTACCAATCAGATTGCCCTCCAGTCATCTTGGTTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGTCTTCTTTTTAGTGGTCTACAAAGCCGCAAAGCTAGATCCTGGCGTTACGGATCAGGTTGGCTACGGGGATTCATAGCTGATTATGGAGTTCCTCTAATGGTTCTGATATGGACTGCTGTGTCTTACATACCAGTCAATAAGGTTCCAAGGGGAGTCCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCCATCCTGTATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTCGATCACAGTGTTGCGTCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCGTCATCTTATCATTATGATTTGCTGCTCTTGGGATTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCTAATGGTGTGATTCCTCAATCTCCAATGCACACGAAGAGCTTAGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTTGTATCTACTGCACGAAAAAGCATGAGGAGGAATGTTAACTTGAGCCAGTTGTACCAAAATATGAAAGAAGCATATGATGAAATGCAGACTCCATTGGTTCCCCAAATGCCACCTACCTTGGGGCTGAAAGAACTGAAGGAGTCTACTATTGAACTGGCTTCAAGTCATGGATATATTGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAACGTCTAAGCAATCTGCTTCAGGCATTGATGGTTGGAGCTTGTGTTGCTGCTATGCCCCTTTTGAAGAAGATACCCACTTCAGTGCTTTGGGGCTACTTTGCCTTTATGGCCATTGAAAGCCTACCAGGAAATCAGTTTTGGGAGCGAATCTTGTATCTTTTCACTGCCCCAAGTCGAAGATACAAACTGCTGGAGGAATACCATGCCACCTTTGTTGAGACCGTTCCCTTCAAAACAGTTGCCATGTTTACTGTGTTCCAGACAGTGTACTTGCTTCTCTGCTTTGGCTTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCACTGTTAATCATGCTTCTTGTCCCAGTACGGCAATATTGCCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAAGAGCTGGATGCAGCAGCATATGAAGAAGCACCTGCCATTGCTTTCAACATGTCCTTTGAAGGTCCAGGTGGACAAGCACCAGCAGTAAATATTAGTGGTGGGGAAATTCTTGATGAAGTTATTACTCGAAGTCGTGGAGAGATTCGACGCACACAAAGCCCGAAAACAACAAGTTCAACACCAACTTCAACCGGAGATATAAGACCAGCTAGTAGCCCTCGGATAGGAAGAAGCATTCCCAGCCCTCGAGTGACTGAATTGAGAGGGGAAAGCAGTCTGAGACCATCTGGGAAGGAGATCAAGTTAACACAAACACCTAGTCCACGCTCACCAGTTCTTGGAAAAGTTACCAAAGGTTCACCTTCAAGCTAA 2169 0.4421 MEETFVPFRGIKNDLKARITCYRQDWSSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGVIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDREDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFGVPKNQREGTNQIALQSSWLFGNGMFALVLSFGLLFSGLQSRKARSWRYGSGWLRGFIADYGVPLMVLIWTAVSYIPVNKVPRGVPRRLFSPNPWSPGAYSNWTVVKEMLNVPILYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQNMKEAYDEMQTPLVPQMPPTLGLKELKESTIELASSHGYIDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLLQALMVGACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTVAMFTVFQTVYLLLCFGLTWIPIAGVLFPLLIMLLVPVRQYCLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEGPGGQAPAVNISGGEILDEVITRSRGEIRRTQSPKTTSSTPTSTGDIRPASSPRIGRSIPSPRVTELRGESSLRPSGKEIKLTQTPSPRSPVLGKVTKGSPSS* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0511 722 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Vra5g0511 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Vra5g0511 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Vra5g0511 722 MobiDBLite consensus disorder prediction 650 668 - -
Vra5g0511 722 PANTHER ANION EXCHANGE PROTEIN 1 707 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vra5g0511 722 MobiDBLite consensus disorder prediction 696 722 - -
Vra5g0511 722 MobiDBLite consensus disorder prediction 642 722 - -
Vra5g0511 722 PANTHER BORON TRANSPORTER 2-RELATED 1 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0511 Vra-Chr5 6127382 6133279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0511 1 697 Antiporters AT3G62270 75.286 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0511 K24194 - gmx:100793554 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0511 5 6127382 6133279 Vra5g0511 5 6127382 6133279 ECH