Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g0470 | ATGCATGGACGTGGAGGTGAGAAGGGCACTCGGCACATGTGGAAAGCCCCCACACTTGGCAACTCGTCTCTGAACGCCGATGTTTCTTCGTCTTCTTCTTCATCGTCAGTGAAGTCGTTCTTTAAGGACCGTCGCAAAATTAGTGTTGGTGAATGTGCTCTCTTCAAACCTTCTGAAGATCGCCCACCATATATTGGTATAATTCGTTATCTGACAATTGGCAAAGATAAAAAATTGAAGTTTGGTGTTAGTTGGCTCTATCGATCTATTGAAGTAAAACTCAGCAAGAGTGTGCCTTTGGAGGCTGCTCCAAACGAAATCTTCTACACCTTCCATAAGGATGAGATTGATGCTGAAGCTCTGCTCCATCCTTGTAAAGTTGCATTTCTTCCTAAGGGGGCAGAACTTCAACCAGGGATTTCTTCATTTTTGTGCAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAAATGATCAAGATTATATTAATGATTGTCAAGAAGAAGTAGATAAACTATTATACAGGAATTGCGTAGAAATGCATGCAACAGTGCAGCCAGGTGGCCGTTCTCCTAAGCCTATGAGTAGTCCAACTTCAACATCTCAGTTAAAATCTGCTTCAGATAGTGTCCAGAATAGTACTTCTTCCTTTCCATCTCACATTAAGGGGAGGAAAAGGGAAAGGGCAGATCAAGGCTCTGAGTCAGCCAAGCGAGAACGATCAATAAAAACTGAGGATGGGGATTCTGGTATTTTCAAGCATGATAACATTTTCAAGACAGAGATTGCAAAAATTACTGAGAAGGGAGGGCTTGTTGATGGTGAAGGAGTTGAAAAATTAGTGCAGCTGATGGTTCCTGATAGAAATGAGAAGAAGATAGATTTAGCTAGCCGGTCATTGCTTGCAGCTGTCGTTGCAGCAACAGATAAGTTAGATTGCCTTAGTCAGTTTGTGCAGCAAAGGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGGAAGATTGGCGATGGTGATAAATCTGCTGAGGAATTTCTGTTGGTATTGCTTCGGGCACTTGATAAACTTCCAGTAAATCTTCAGGCTTTACAAACATGCAACATTGGAAAATCTGTGAATCATTTGCGAAGTCACAAAAATGCTGAAATTCAGCGGAAAGCAAGAGGTTTAGTTGATACATGGAAGAAACGTGTTGAAGCTGAAATGAATATAAATGATGCAAAGTCTGGTTCAGGTACCAATGTCCACTGGCCTGCCAAATCACGTCCTTCTGATGTTGGTCAAGGTGGGAATAGACATTCAGGTGCATCATCAGATGTTGCCATGAAGAGTTCAGTTACCCAGCTTTCTGCTTCGAAGACCACCTCTGTGAAGATTGTCCAGGGAGAGAATATTACTAGATCTGCATCAACATCTGCATTTCCAGGGCCTGCAAAATCAGTGCCGTCACCTGCAGCTGTGACTGCTAATTTAAAAGATGGGCAGCCTCGTATTGTTGCTGTAAATGGAGGTTCTGATCCTCCCATGGCAAATGCAAGGGATGAGAAAAGTTGTAGTTCTAGTCAATCTCACAACAACAGTCAATCTTGTTCTAGCGACCATGCTAAAACTGGAGGTCACTCAGTAAAGGAAGATGCCCGAAGCTCTACTGCAATGAGTGCAAATAAGATTTCTGGAGGCTCTTCACGTCATCGAAAATCCATTAATGGATTTTCAGGTTCATCTCCATCTGGAGGGCAAAGGGAAACCGGATCAAGCAGGAATTCCTCCTTGCACAAAAATTTAACTTCAGAAAAAATATCTCAACCTGGATTAATGGATAAAGCAGTTGATGGAACTTCTCTTGAGGGCAATATTCCAAAGCTGATTGTTAAAATTCCAAATCAAGGTAGAAGTCCTACACAAAGTGTCAGTGCTGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCTTCATCTCCTGTTCTTCCCGAGAAGCATGATCAGTCTGATCACAGCCCAAAGGAAAAGAGTGACCTTTATCGTGTAAATATTGGTTCAGATATTAATACTGAATCTTGGCAGAGTAATGACTTTAAAGAGGTATTGACTGGCTCTGATGAGGGTGATGGATCACCTGCTGCAGGTACTGATGAAGAACACTGTCGGACCGGCAATGATTGTAAGAAGGCATTGGAAATATCAAAAGCTGCTTCATCATCATCTGGAAATGAAAATAAAGCTGGCAATTTGCAGGATGCTTCTTACAGCTCAATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCTGATGATGGAGGAATGAATCTTCTTGCTAGCGTGGCTGCTGGAGAGATATTGAAATCTGAATTGTTAACTCCAACTGGATCTCCAGAAAGAAACACAGCTGCTGTTGAACAGTCATGCACAGACAATGGTGTTAAGTCCTCTGAAGAAAATCTTGTTCGTGATGAATGTCACTCAAATAATGGTCTTGATGTTGAACATAAGAATCTGGCCTCTGTAACAGGTGATCTAGGGGCAAATGGTGAAAGCGATTCTGATTTTCAAGCTTCAGGAGGAAAAACTGCAAGAGAGCTAAATAAGCGTGTTGATGCATGTAGTATGGATTTACAACAGGTTTCTGAAACTACTTTGGAAAGCAAAGGAAAATTAAATGAAAAATCTGGACCTACTTCACTGGGTGGACTTGCTGAAAATTCTGTACAAGAAGCTGGAGATGGTGATGGAAGCAAGCAGCTACAGGAGGTTGTTCAGGGAGTCAATGCTGGCGAAATTCATGATAAAATCAGTTGTGTTGCTGAAGTTGAGGCAGAAGCAGCTAAAAAATTGTCACATACACCTGCGGAAGTGGATGTACAGAGTGATAACTATACTGCTGAAGGATCAAGTGGCAGTGGACAGACAGTTAAAAAGCCTCCTCCTGTACTTGTTCAGTCTGATTTGGCAAGAGGTAAAGATGATAAAGCACTCCATTCTTCTGGTTATAGTGTTGACAAGGTTCTTAAAGACTTCCCTGAACGGGAATCTGACAAAACTGATGATGTTGATGCTGAGAATCATGTCAACCAGTCTAGAAGTAAAAGAAATGAGTCTGAAAGTGATACCTTGACCATGCCTGAGAATAGAGGTACATGTTCTATTGTGACTGGTCTTGTTGCTGAACATGTAGAGGAGAATTTAGAAACGAGAGATGTTCGTGACCAACCTTCTAGAGAGGATCTTCCTGAAGATTCACCTAGTGTTCTTTCACAAGAAATCGATAAGCATCTCAATTCTAAAAGGTTGAAGTTGACTTCCTCAGAAGCAGAGGAGGCTGAGGAGTGCACCTCTACCACTGCAGATGCTTCTTCGATGTCTGCTGCAGCTGTGTCAGATGCGGATGCAAAGGTTGGATTTGATTTAAATGAAGGGCTCAATGCAGATGATGGAAGATGTGAGTTCAACAGCATTGCCAATTCAGGATGTGCACCTTGTGGTCGATTGATCAGTCCTGTTCCATTTCCTGCTTCATCTATGTCTTGTGGTATTCTTGCCCCAGTCACCGTGGCATCTGCTGCTAAGGGGCACTTTGTGCCTCCCGAAGATTTATTGAGAAGTAAAGGTGAAATTGGTTGGAAGGGATCTGCTGCCACCAGTGCATTCAGGCCAGCTGAACCCAGGAAAGTTATGGAAATGTCTCTTGGTACATCAGCTGCCCCTATTCCTGATGCTCCAGCTGGAAAGCAGAGTCGAGCACCATTGGATATTGACTTGAATGTGGCCGATGAAAGAATCCTTGATGACATTTCTTGTGCTCGACACACAAATTCTATATCTCTTGCAACTGATAGCCATGATCCTGTATGCAGTAAAATACCTTCACCTGTTCGCAGCTCTGGAGGGCTTGGTCTTGACTTAAACCAAGTGGATGATGCTTCTGACATGGGCATTTGCTTGAACAGTAATCATAAAATTGATGTGCCAATTATGCAGGGGAAATCATCATTGGGTGGTCCACCAATTAGAGAAGTGAATGTCCACAGGGACTTTGATTTGAACAACGGACCTTCTGTGGATGAAATCACCACCGAATCCTCATTGTTCTCTCATCACTCCAGGAGCAACGTGCCTTCTCAATTACCTGTTTCTGGACTTAGAATGACTACTGAGCCAGGCAACTTCTCTTGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCTCCAAATGGGCCACAAAGGTTGTTGACTCCTGCAGCTGGTGGCAACCCATTTGGACCTGATATTTATAGGGCCCCAGTATTGTCATCTTCTCCTGCAGTGTCATATCCATCTGCTCCATTTGAGTATCCCGTCTTCCCTTTTAACTCCAGCTTCCCTCTTCCATCAGCTTCTTTTTCTGCTGGGTCAACTACTTATGTATATCCAACATCAGCCAATCGGCTTTGCTTCCCTGCAGTAAATTCACAGTTAATGGGGCCTGCCGGCACAGTTTCATCTCATTATCCCAGGCCCTATGTTGTTGGTCTTACAGAAGGTAACAATAGTGGTAGTGCTGAGACCAGTAGAAAATGGACAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGCTGTTCAGACATGGAGGGGAGAGATGAGAGTGTTCGGAAGAGGAAGGAGCCTGATGGAGGGTGGGATGCCTACAACCAATCCTCATGGCAATAG | 4761 | 0.4314 | MHGRGGEKGTRHMWKAPTLGNSSLNADVSSSSSSSSVKSFFKDRRKISVGECALFKPSEDRPPYIGIIRYLTIGKDKKLKFGVSWLYRSIEVKLSKSVPLEAAPNEIFYTFHKDEIDAEALLHPCKVAFLPKGAELQPGISSFLCRRVYDIANKCLWWLNDQDYINDCQEEVDKLLYRNCVEMHATVQPGGRSPKPMSSPTSTSQLKSASDSVQNSTSSFPSHIKGRKRERADQGSESAKRERSIKTEDGDSGIFKHDNIFKTEIAKITEKGGLVDGEGVEKLVQLMVPDRNEKKIDLASRSLLAAVVAATDKLDCLSQFVQQRGLPVFDEWLQEVHKGKIGDGDKSAEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRSHKNAEIQRKARGLVDTWKKRVEAEMNINDAKSGSGTNVHWPAKSRPSDVGQGGNRHSGASSDVAMKSSVTQLSASKTTSVKIVQGENITRSASTSAFPGPAKSVPSPAAVTANLKDGQPRIVAVNGGSDPPMANARDEKSCSSSQSHNNSQSCSSDHAKTGGHSVKEDARSSTAMSANKISGGSSRHRKSINGFSGSSPSGGQRETGSSRNSSLHKNLTSEKISQPGLMDKAVDGTSLEGNIPKLIVKIPNQGRSPTQSVSAGSFDDPTIMNSRASSPVLPEKHDQSDHSPKEKSDLYRVNIGSDINTESWQSNDFKEVLTGSDEGDGSPAAGTDEEHCRTGNDCKKALEISKAASSSSGNENKAGNLQDASYSSINALIEGVKYSEADDGGMNLLASVAAGEILKSELLTPTGSPERNTAAVEQSCTDNGVKSSEENLVRDECHSNNGLDVEHKNLASVTGDLGANGESDSDFQASGGKTARELNKRVDACSMDLQQVSETTLESKGKLNEKSGPTSLGGLAENSVQEAGDGDGSKQLQEVVQGVNAGEIHDKISCVAEVEAEAAKKLSHTPAEVDVQSDNYTAEGSSGSGQTVKKPPPVLVQSDLARGKDDKALHSSGYSVDKVLKDFPERESDKTDDVDAENHVNQSRSKRNESESDTLTMPENRGTCSIVTGLVAEHVEENLETRDVRDQPSREDLPEDSPSVLSQEIDKHLNSKRLKLTSSEAEEAEECTSTTADASSMSAAAVSDADAKVGFDLNEGLNADDGRCEFNSIANSGCAPCGRLISPVPFPASSMSCGILAPVTVASAAKGHFVPPEDLLRSKGEIGWKGSAATSAFRPAEPRKVMEMSLGTSAAPIPDAPAGKQSRAPLDIDLNVADERILDDISCARHTNSISLATDSHDPVCSKIPSPVRSSGGLGLDLNQVDDASDMGICLNSNHKIDVPIMQGKSSLGGPPIREVNVHRDFDLNNGPSVDEITTESSLFSHHSRSNVPSQLPVSGLRMTTEPGNFSWLPSSGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRLLTPAAGGNPFGPDIYRAPVLSSSPAVSYPSAPFEYPVFPFNSSFPLPSASFSAGSTTYVYPTSANRLCFPAVNSQLMGPAGTVSSHYPRPYVVGLTEGNNSGSAETSRKWTRQGLDLNAGPGCSDMEGRDESVRKRKEPDGGWDAYNQSSWQ* | 1587 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 520 | 542 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 951 | 1052 | - | - | |
Vra5g0470 | 1586 | CDD | TFIIS_I | 340 | 405 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 885 | 907 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 664 | 680 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 1532 | 1547 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 496 | 618 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 694 | 723 | - | - | |
Vra5g0470 | 1586 | SMART | TFS2_5 | 333 | 406 | IPR003617 | GO:0005634 | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 958 | 978 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 1532 | 1586 | - | - | |
Vra5g0470 | 1586 | SMART | BAH_4 | 45 | 160 | IPR001025 | GO:0003682 | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 410 | 445 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 187 | 251 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 192 | 222 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 550 | 607 | - | - | |
Vra5g0470 | 1586 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 1586 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 885 | 919 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 632 | 680 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 1009 | 1044 | - | - | |
Vra5g0470 | 1586 | Pfam | BAH domain | 46 | 153 | IPR001025 | GO:0003682 | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 1561 | 1576 | - | - | |
Vra5g0470 | 1586 | Pfam | TFIIS helical bundle-like domain | 355 | 404 | IPR017923 | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 1068 | 1083 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 634 | 663 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 793 | 818 | - | - | |
Vra5g0470 | 1586 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 315 | 417 | IPR035441 | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 223 | 251 | - | - | |
Vra5g0470 | 1586 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 279 | 408 | IPR035441 | - | |
Vra5g0470 | 1586 | Gene3D | - | 26 | 267 | IPR043151 | - | |
Vra5g0470 | 1586 | ProSiteProfiles | TFIIS N-terminal domain profile. | 327 | 407 | IPR017923 | - | |
Vra5g0470 | 1586 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 1586 | - | - | |
Vra5g0470 | 1586 | ProSiteProfiles | BAH domain profile. | 45 | 160 | IPR001025 | GO:0003682 | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 795 | 817 | - | - | |
Vra5g0470 | 1586 | MobiDBLite | consensus disorder prediction | 1068 | 1094 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g0470 | Vra-Chr5 | 5174053 | 5181143 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Vra5g0470 | BAH | 4.6e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g0470 | - | - | gmx:100788512 | 2514.18 |