LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g0458	ATGGATCGAGAAAATGGCGACGGTGACATAGAAGGCGGTGGCGGCGATGATGGTTTTCGCTCGGGCCGCAAGTATCGTCCTGTCTTGGCCAATGATCGCGCGGTGCTCGAAATGTCTTCCATAGATCCGGGATCTACTTCTTCTTCCACTTCTGCATTTACAGATATTCCTTCTAATCTCAGAAAAGTGAAAACTAGTCGTAGTGGGAGTTCGGATGCCAAAGAAGGCAACGCTTCTCATCAGCAGCAACCTAATGGATCCCAGCAGCAGGAATCTAAATTGGAACTGTTCGGTTTTGACTCTCTTGTCAACATTCTTGGTCTCAAAAGTATGACTGGCGAGCAGGTTGCACAACCATCAAGTCCTAGAGATGGTGAGGATATATCTATCACTGCTGGCTTGCCAAAGCCTGCTGCTCCCAAACTTGGTACATTGATGGGTGTATTTATTCCATGTATACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGCATGGCTGGCATAGGACAAACATTGTTGCTTGTTTCTTTATGTGGCACCTGTACATTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGAGGCTGCCACACATGTTAACGGGACTGCAGTTACACAACCAATAGAGAGTCCAAGTTCTCATGACTTGCAAATATATGGGATTGTTGTGACTATTTTGTTATGCTTTATTGTATTTGGAGGTGTGAAGATGATAAATCGGGTTGCACCTGCTTTTCTCATACCTGTTTTATTTTCAGTCATCTGCATATTTTTGGGAATTTTTGTGGCAAGGAAGGACCATCCCACAGAGGGAATTACTGGGCTGAATTCACAGACATTTAGAGAAAATTGGAGTTCAGATTATCAAAAGACTAATAATGCTGGAATTCCACAAACTGATGGCTCGGTAACCTGGGATTTCAATTCATTGGTAGGCCTCTTTTTCCCTGCTGTGACGGGAATAATGGCGGGTTCTAACCGATCATCCTCTCTGAAAGATACTCAGCGATCAATTCCTGTTGGAACTTTAGCAGCAACTCTTGCAACTACTTGTCTGTATTTTATTTCTTTGGTGCTGTTTGGCTCTGTTGCCAGCAGAGAGAAGCTTTTAACTGACAGGCTACTCACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGAATTATTCTTTCGACTATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCGATAGCCAATGATGATATTTTACCTATTTTGAATTACTTTAAAGCTGCAGATGGCGGTGAACCACATGTTGCTACCCTTTTTACTGCTTTCTTGTGTATAGGATGTGTCATTATTGGGAATCTGGATCTCATCACTCCAACTGTAACTATGTTTTTCCTTCTATGTTACACTGGTGTCAACTTATCCTGCTTCCTTCTTGATCTACTAGATGCCCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGTATGTCCCTTGTGGGAGCATTACTATGCATAGTGATCATGTTCCTAATCTCTTGGTCATTCACTGTGGTATCTTTGGCCCTTGCAAGCCTCATATATAAGTACGTGAGCATTAAAGGAAAAGCTGGGGACTGGGGTGATGGTTTCAAAAGTGCCTATTTCCAACTAGCACTTCGTAGCCTTCGGTCCCTTGGAGCAAGTCAAGTGCACCCAAAGAATTGGTATCCAATTCCACTAATATTTTGCCGACCCTGGGGCAAACTGCCAGAAAACGTTCCCTGTCATCCCAAACTTGCAGATTTTGCGAACTGCATGAAGAAGAAAGGTCGAGGAATGTCCATATTTGTCTCTATACTAGATGGTGATTACCATGAACGTGCTGAAGATGCCAAAACTGCTTGTAAACAACTTAGCACCTACATTGATTACAAAAATTGTGAAGGTGTGGCTGAGATTGTTGTAGCCCCGAACATGTCTGAAGGCTTCCGTGGCATTATTCAGACAATGGGCCTGGGCAATCTCAAGCCAAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGAAGGGAAAACTTGACAGAAATCCCTGCCACCTTCGTTGGGATAATCAATGATTGTATTGTTGCAAACAAAGCTGTGGTTATAGTTAAGGGTCTTGATGAATGGCCGAACGAGTACCAGAGGCAGTATGGTACGATTGATTTGTACTGGATTGTAAGAGATGGTGGTCTCATGCTGCTTCTCTCTCAGCTCCTTCTTACCAAGGCGAGCTTTGAGAATTGCAAGATTCAGGTCTTTTGTATCGCAGAAGACGATGGAGATGCAGAGGGACTGAAAGCTGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCGGAAGTTTTTGTCATAACAATGAAATGGGATGCACAGGTGGATGGGGGTGGTGGGTCTCCACAAGATGAGTCGTCAGAAGCATTTACTAGTGCTCAGCAGAGAATTGATGATTACTTAACCCAGATGAAGGTGAGATCACAGAAAGAAGGTACTCCTCTAATGGCAGATGGTAAGCCTGTGGTTGTGAACGAGAAGCAGGTGGAGAAGTTTCTTTACACAACGCTAAAGCTCAATTCAATAATTCTGAGATATTCAAGAATGGCTGCTGTTGTATTGGTAAGTCTTCCTCCACCTCCACTGAGTCACCCAGCATACTTCTATATGGAGTACATGGATCTGTTGCTGGAGAATGTACCAAGGATTTTGATTGTAAGAGGTTATCGTAGAGACGTTGTAACTCTATTCACGTAG	2810	0.4359	MDRENGDGDIEGGGGDDGFRSGRKYRPVLANDRAVLEMSSIDPGSTSSSTSAFTDIPSNLRKVKTSRSGSSDAKEGNASHQQQPNGSQQQESKLELFGFDSLVNILGLKSMTGEQVAQPSSPRDGEDISITAGLPKPAAPKLGTLMGVFIPCIQSILGIIYYIRFSWIVGMAGIGQTLLLVSLCGTCTFLTSISLSAIATNGAMKRLPHMLTGLQLHNQRVQVLMTCKYMGLLLFCYALLYLEVRIGLHLLFSYLFYFQSSAYFWEFLWQGRTIPQRELLGIHRHLEKIGVQIIKRLIMLEFHKLMARPGISIHWASFSLLREWRVLTDHPLKILSDQFLLELQQLLQLLVCILFLWCCLALLPAERSFLTGYSQLQLPGLFLHLKLELFFRLWVLLFRALVPHVCLQRPMMIFYLFITLKLQMAVNHMLLPFLLLSCVDVSLLGIWISSLQLLCFSFYVTLVSTYPASFLIYMPLVGVLGGNFTIGVCPLWEHYYA*SCSSLGHSLWYLWPLQASYISTALKEKLGTGVMVSKVPISNHFVAFGPLEQVKCTQRIGIQFHYFADPGANCQKTFPVIPNLQILRTARRKVEECPYLSLYMVITMNVLKMPKLLVNNLAPTLITKIVKVWLRLLPRTCLKASVALFRQWAWAISSQTLWCVTQKSGEGKTQKSLPPSLGSMIVLLQTKLWLLRVLMNGRTSTRGSMVRLICTGLEMVVSCCFSLSSFLPRRALRIARFRSFVSQKTMEMQRDKLMKNSFMIFGCKRKFLSQNGMHRWMGVVGLHKMSRQKHLLVLSRELMITPRRDHRKKVLLWQMVSLWLTRSRWRSFFTQRSSIQFDIQEWLLLYWVFLHLHVTQHTSIWSTWICCWRMYQGFLEVIVETLLYSR	936

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g0458	885	MobiDBLite	consensus disorder prediction	113	132	-	-
	Vra5g0458	885	MobiDBLite	consensus disorder prediction	1	25	-	-
	Vra5g0458	885	MobiDBLite	consensus disorder prediction	38	91	-	-
	Vra5g0458	885	Pfam	Amino acid permease	147	203	IPR004841	GO:0016020\|GO:0055085
	Vra5g0458	885	PANTHER	CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1	16	220	-	-
	Vra5g0458	885	PANTHER	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	16	220	IPR004842	GO:0006811\|GO:0015377\|GO:0016021
	Vra5g0458	885	MobiDBLite	consensus disorder prediction	40	91	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra5g0458	142	231	Inorganic Solute Cotransporters	AT1G30450	64.835	3.94e-27	116

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g0458	K14427		-	gmx:100795205	320.857

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra5g0458	5	4834551	4849754	Vra5g0458	5	4834551	4849754	ECH

Showing 1 to 1 of 1 entries