Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0458 ATGGATCGAGAAAATGGCGACGGTGACATAGAAGGCGGTGGCGGCGATGATGGTTTTCGCTCGGGCCGCAAGTATCGTCCTGTCTTGGCCAATGATCGCGCGGTGCTCGAAATGTCTTCCATAGATCCGGGATCTACTTCTTCTTCCACTTCTGCATTTACAGATATTCCTTCTAATCTCAGAAAAGTGAAAACTAGTCGTAGTGGGAGTTCGGATGCCAAAGAAGGCAACGCTTCTCATCAGCAGCAACCTAATGGATCCCAGCAGCAGGAATCTAAATTGGAACTGTTCGGTTTTGACTCTCTTGTCAACATTCTTGGTCTCAAAAGTATGACTGGCGAGCAGGTTGCACAACCATCAAGTCCTAGAGATGGTGAGGATATATCTATCACTGCTGGCTTGCCAAAGCCTGCTGCTCCCAAACTTGGTACATTGATGGGTGTATTTATTCCATGTATACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGCATGGCTGGCATAGGACAAACATTGTTGCTTGTTTCTTTATGTGGCACCTGTACATTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGAGGCTGCCACACATGTTAACGGGACTGCAGTTACACAACCAATAGAGAGTCCAAGTTCTCATGACTTGCAAATATATGGGATTGTTGTGACTATTTTGTTATGCTTTATTGTATTTGGAGGTGTGAAGATGATAAATCGGGTTGCACCTGCTTTTCTCATACCTGTTTTATTTTCAGTCATCTGCATATTTTTGGGAATTTTTGTGGCAAGGAAGGACCATCCCACAGAGGGAATTACTGGGCTGAATTCACAGACATTTAGAGAAAATTGGAGTTCAGATTATCAAAAGACTAATAATGCTGGAATTCCACAAACTGATGGCTCGGTAACCTGGGATTTCAATTCATTGGTAGGCCTCTTTTTCCCTGCTGTGACGGGAATAATGGCGGGTTCTAACCGATCATCCTCTCTGAAAGATACTCAGCGATCAATTCCTGTTGGAACTTTAGCAGCAACTCTTGCAACTACTTGTCTGTATTTTATTTCTTTGGTGCTGTTTGGCTCTGTTGCCAGCAGAGAGAAGCTTTTAACTGACAGGCTACTCACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGAATTATTCTTTCGACTATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCGATAGCCAATGATGATATTTTACCTATTTTGAATTACTTTAAAGCTGCAGATGGCGGTGAACCACATGTTGCTACCCTTTTTACTGCTTTCTTGTGTATAGGATGTGTCATTATTGGGAATCTGGATCTCATCACTCCAACTGTAACTATGTTTTTCCTTCTATGTTACACTGGTGTCAACTTATCCTGCTTCCTTCTTGATCTACTAGATGCCCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGTATGTCCCTTGTGGGAGCATTACTATGCATAGTGATCATGTTCCTAATCTCTTGGTCATTCACTGTGGTATCTTTGGCCCTTGCAAGCCTCATATATAAGTACGTGAGCATTAAAGGAAAAGCTGGGGACTGGGGTGATGGTTTCAAAAGTGCCTATTTCCAACTAGCACTTCGTAGCCTTCGGTCCCTTGGAGCAAGTCAAGTGCACCCAAAGAATTGGTATCCAATTCCACTAATATTTTGCCGACCCTGGGGCAAACTGCCAGAAAACGTTCCCTGTCATCCCAAACTTGCAGATTTTGCGAACTGCATGAAGAAGAAAGGTCGAGGAATGTCCATATTTGTCTCTATACTAGATGGTGATTACCATGAACGTGCTGAAGATGCCAAAACTGCTTGTAAACAACTTAGCACCTACATTGATTACAAAAATTGTGAAGGTGTGGCTGAGATTGTTGTAGCCCCGAACATGTCTGAAGGCTTCCGTGGCATTATTCAGACAATGGGCCTGGGCAATCTCAAGCCAAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGAAGGGAAAACTTGACAGAAATCCCTGCCACCTTCGTTGGGATAATCAATGATTGTATTGTTGCAAACAAAGCTGTGGTTATAGTTAAGGGTCTTGATGAATGGCCGAACGAGTACCAGAGGCAGTATGGTACGATTGATTTGTACTGGATTGTAAGAGATGGTGGTCTCATGCTGCTTCTCTCTCAGCTCCTTCTTACCAAGGCGAGCTTTGAGAATTGCAAGATTCAGGTCTTTTGTATCGCAGAAGACGATGGAGATGCAGAGGGACTGAAAGCTGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCGGAAGTTTTTGTCATAACAATGAAATGGGATGCACAGGTGGATGGGGGTGGTGGGTCTCCACAAGATGAGTCGTCAGAAGCATTTACTAGTGCTCAGCAGAGAATTGATGATTACTTAACCCAGATGAAGGTGAGATCACAGAAAGAAGGTACTCCTCTAATGGCAGATGGTAAGCCTGTGGTTGTGAACGAGAAGCAGGTGGAGAAGTTTCTTTACACAACGCTAAAGCTCAATTCAATAATTCTGAGATATTCAAGAATGGCTGCTGTTGTATTGGTAAGTCTTCCTCCACCTCCACTGAGTCACCCAGCATACTTCTATATGGAGTACATGGATCTGTTGCTGGAGAATGTACCAAGGATTTTGATTGTAAGAGGTTATCGTAGAGACGTTGTAACTCTATTCACGTAG 2810 0.4359 MDRENGDGDIEGGGGDDGFRSGRKYRPVLANDRAVLEMSSIDPGSTSSSTSAFTDIPSNLRKVKTSRSGSSDAKEGNASHQQQPNGSQQQESKLELFGFDSLVNILGLKSMTGEQVAQPSSPRDGEDISITAGLPKPAAPKLGTLMGVFIPCIQSILGIIYYIRFSWIVGMAGIGQTLLLVSLCGTCTFLTSISLSAIATNGAMKRLPHMLTGLQLHNQ*RVQVLMTCKYMGLL*LFCYALLYLEV*R**IGLHLLFSYLFYFQSSAYFWEFLWQGRTIPQRELLG*IHRHLEKIGVQIIKRLIMLEFHKLMAR*PGISIHW*ASFSLL*RE*WRVLTDHPL*KILSDQFLLEL*QQLLQLLVCILFLWCCLALLPAERSF*LTGYSQLQLPGLFLH*LKLELFFRLWVLLFRA*LVPHVCLQR*PMMIFYLF*ITLKLQMAVNHMLLPFLLLSCV*DVSLLGIWISSLQL*LCFSFYVTLVSTYPASFLIY*MPLVGVLGGNFTIGVCPLWEHYYA**SCS*SLGHSLWYLWPLQASYIST*ALKEKLGTGVMVSKVPISN*HFVAFGPLEQVKCTQRIGIQFH*YFADPGANCQKTFPVIPNLQILRTA*RRKVEECPYLSLY*MVITMNVLKMPKLLVNNLAPTLITKIVKVWLRLL*PRTCLKASVALFRQWAWAISSQTLW*CVTQKSGEGKT*QKSLPPSLG*SMIVLLQTKLWL*LRVLMNGRTSTRGSMVRLICTGL*EMVVSCCFSLSSFLPRRALRIARFRSFVSQKTMEMQRD*KLM*KNSFMIFGCKRKFLS*Q*NGMHRWMGVVGLHKMSRQKHLLVLSRELMIT*PR*R*DHRKKVLL*WQMVSLWL*TRSRWRSFFTQR*SSIQ*F*DIQEWLLLYW*VFLHLH*VTQHTSIWSTWICCWRMYQGF*L*EVIVETL*LYSR 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0458 885 MobiDBLite consensus disorder prediction 113 132 - -
Vra5g0458 885 MobiDBLite consensus disorder prediction 1 25 - -
Vra5g0458 885 MobiDBLite consensus disorder prediction 38 91 - -
Vra5g0458 885 Pfam Amino acid permease 147 203 IPR004841 GO:0016020|GO:0055085
Vra5g0458 885 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 16 220 - -
Vra5g0458 885 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 16 220 IPR004842 GO:0006811|GO:0015377|GO:0016021
Vra5g0458 885 MobiDBLite consensus disorder prediction 40 91 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0458 142 231 Inorganic Solute Cotransporters AT1G30450 64.835 3.94e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0458 K14427 - gmx:100795205 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0458 5 4834551 4849754 Vra5g0458 5 4834551 4849754 ECH