Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0433 ATGCATACGTGTCATGCCTCAATGGTATGGCATCTCCATAATACCACACCCTTTACCCTATCCGTTCTTCTCTCTCCATATTTCTCACTCTCTCTTTCTCTCTCTTCACTCTCCGCCATGGCCCCAGCCGCCGGAGCCGTCGCGTTGCACTCTTCCCTTTGCTCCACCGCTTCTGAGAAACCGTATTCTCCTCTAAGATCAACCCTTCTGCATGTGGCACCCAAACCCAAAAGCCTCCTCCAAAACCACCCACTTTACCCTCCAACGCATGCCAAACTCTCCCTTGAATTCAAAGAGAAAATTCTCTGCCTTGAGGTGATGGGTATTGATGCAGGCAAAGCACTCTCCCAAAACCCTGATCTTCGCACAGCCACCATGGAATCCATACAGTCCATCATCACCTTCCTTTTCTCCAATGGCATCCTTGAGAAGGACCTGCCCAGAATCTTTGGCATGTGCCCCAAGATTCTCACTGCTGACATCAAAACTGATCTCACCCCAGTTTTTGATTTCATCTTGAATGAACTCAAAGTCCCCGAAAATAGCTTCAGGAGGGTGATCAATAAGTGCCCAAGATTGCTTACATCCAGTGTGAAAGACCAGCTCAGGCCAGCTTTGCTTTACCTAAGGAGACTTGGATTCAAGGATTCCGGGGCCTTGGCTTATCAAGATTCTGTTCTCTTGGTGTCTAATGTAGAACACACCCTCATCCCTAAACTTAGATTTTTGGAGACTTTGGGACTTTCCAAGGATGAGATTAGGAGTATGGTGTTGAGATGCCCAGCACTGCTCACTTTCAGTATAGAGAATAATTTTCAGCCAAAGTATGACTATTTTTCTGGGGAAATGGGAAGAAAAGTGGTGGAGCTGAAAGAGTTTCCTCAGTACTTTGCTTTTAGTTTGGAAAACAGGATAAAACCTAGACACACCGAGGTTGTGCAGAGTGGGATCACTTTACCTTTGTCAGTGATGCTTAAAAGCACTGATGAAGAATTTAGGGAGTTGTTAAAGCAGGGAGGTGGATGA 1026 0.461 MHTCHASMVWHLHNTTPFTLSVLLSPYFSLSLSLSSLSAMAPAAGAVALHSSLCSTASEKPYSPLRSTLLHVAPKPKSLLQNHPLYPPTHAKLSLEFKEKILCLEVMGIDAGKALSQNPDLRTATMESIQSIITFLFSNGILEKDLPRIFGMCPKILTADIKTDLTPVFDFILNELKVPENSFRRVINKCPRLLTSSVKDQLRPALLYLRRLGFKDSGALAYQDSVLLVSNVEHTLIPKLRFLETLGLSKDEIRSMVLRCPALLTFSIENNFQPKYDYFSGEMGRKVVELKEFPQYFAFSLENRIKPRHTEVVQSGITLPLSVMLKSTDEEFRELLKQGGG* 342
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0433 341 PANTHER CGI-12 PROTEIN-RELATED 62 338 IPR003690 GO:0003690|GO:0006355
Vra5g0433 341 Gene3D Transcription termination factor 3, mitochondrial 199 338 IPR038538 -
Vra5g0433 341 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 62 338 - -
Vra5g0433 341 SMART mt_12 184 215 IPR003690 GO:0003690|GO:0006355
Vra5g0433 341 SMART mt_12 254 286 IPR003690 GO:0003690|GO:0006355
Vra5g0433 341 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Vra5g0433 341 SMART mt_12 147 179 IPR003690 GO:0003690|GO:0006355
Vra5g0433 341 SMART mt_12 218 249 IPR003690 GO:0003690|GO:0006355
Vra5g0433 341 Pfam mTERF 227 332 IPR003690 GO:0003690|GO:0006355
Vra5g0433 341 Pfam mTERF 104 216 IPR003690 GO:0003690|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra5g0433 Vra-Chr5 4553623 4554844 Dispersed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra5g0433 mTERF 4e-28 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0433 K15032 - gmx:100788221 528.865