LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g0422	ATGTTGAAGGAGAAGGGAGGGAGCCGGCCCCCGTGGGTGGGGCTGGCCGCCGCCATCTGGGTTCAGATCACGGTGGGGAACGCCGCCAGCTTCCCACTTTACTCCTACTCCTTGAAATCAGTGCTGGGTTTCGACCAGCGTCACGTCACGCTCCTCGGTGTGGCCGTCGACATCGGCGAAAACTTCGGCCTCCCCGCCGGCATCGCCAGCGACATGTTCCCCCCTTGGCTCGTCCTCCTCGTCGGTTCCCTCTCCGCCTTCCTCGGCTACGGCATTATGTTCCTCGCCATCTCCCAGACCCTTCCATCACTCCATTTCTTACTGTTGCAATTTTCTGAGATAACAACGCGAGGGGAGGAAGACACCACCACCTTGCTGTCAATTTTCAGCTTTTGCAATTTTCTGGGGCGGCTTGGTGGAGGAGTTGTATCAGAACATTTTGTCCGGACAAAATCACTTCCAAGGACTGTGTGGATGGGGTGCAGGCAGATAATTATGTTCATTGTATACCTTCTGTTTGCCTATGCTATCAGTGGAACCCTTTATCCTGCAGTTGCATTCCTAGGTGTCTGCTATGGCGTACATATCAGCGTGATCATCCCCACTGTTTCTGAAGTTTTTGGTCTGAAGCACTACGGTATACTGGGCAGCCTCATGGGGTTGGGGAGTCCAATTGGTGCAATGCTCTTTTCTGTTCTGCTAGCAGGGAAGATATACGATAGTGAGGCAGCAAAGCAGCATGATTCTCTTGTTTCCTGCCTCGGTCCAAATTGCTTTAAGCTTACCTTTCTCATTCTTGCTGGAGTGTGTGCTTCTCTTGGTAGAGGTGTCAATTTAACTCATGGTTTCAGGATCTATTTGCTAGGTCTACTTGGTATCATCTTCAGCGTTACACGGACTCTGAGAATTAAGCCTGTTTACCGAATGCTTTATGCTGGAGGCTTTTTAAGGCTCCCTCAGACATCTTCAACTCACTAA	978	0.5092	MLKEKGGSRPPWVGLAAAIWVQITVGNAASFPLYSYSLKSVLGFDQRHVTLLGVAVDIGENFGLPAGIASDMFPPWLVLLVGSLSAFLGYGIMFLAISQTLPSLHFLLLQFSEITTRGEEDTTTLLSIFSFCNFLGRLGGGVVSEHFVRTKSLPRTVWMGCRQIIMFIVYLLFAYAISGTLYPAVAFLGVCYGVHISVIIPTVSEVFGLKHYGILGSLMGLGSPIGAMLFSVLLAGKIYDSEAAKQHDSLVSCLGPNCFKLTFLILAGVCASLGRGVNLTHGFRIYLLGLLGIIFSVTRTLRIKPVYRMLYAGGFLRLPQTSSTH*	326

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g0422	325	PANTHER	NODULIN-LIKE/MFS TRANSPORTER	2	113	-	-
	Vra5g0422	325	PANTHER	NODULIN-LIKE/MFS TRANSPORTER	116	325	-	-
	Vra5g0422	325	Pfam	Nodulin-like	11	110	IPR010658	-
	Vra5g0422	325	SUPERFAMILY	MFS general substrate transporter	118	271	IPR036259	-
	Vra5g0422	325	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	2	113	-	-
	Vra5g0422	325	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	116	325	-	-
	Vra5g0422	325	Gene3D	MFS general substrate transporter like domains	106	305	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra5g0422	Vra-Chr5	4406619	4412627	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra5g0422	59	325	Nodulin-like Gene Family	AT1G80530	41.791	8.05e-59	196

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g0422	-		-	vra:106761681	568.926