Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0412 ATGGAACCTCAATTCCTCTTTCTTTCTTTCTTCCTTTCAGCACCTCTACTTTACTTCTTACTCGCCCTTTATTTCAACAACCACAACCACCACCGCCTCCCTCCCTCTCCACGGTGGCGCCTCCCAATACTAGGGCACATGCACCTGTTGGGTCCTCTCATCCACCAATCCCTCCACACCCTCGCCCTCCAACTCGGACCCTTTTTCTCTCTTCACTTCGCTTCCCTTCCCTGTATCATTGTTTCTTCTCCTCACTACGCCAAACTCGTCCTCCACACCTACCAACACGCATTCATCAACCGCATGGAAACCATCGCCGTCAAACGCCTCACCTACGATTCCTCCCTGGCTTTCGCGCGTTACGGTGAATACTGGAGGTTCATCAAGAAGCTCAGCATGAACGAGCTTCTGGGGTCACGTAGCATCAACAACTTCCGCCACCTGCGTCAGCAAGAGACACGTGGCTTTCTGAGGGTTCTGGCCCTGAAAGCCAAGGCTGGTGAAGCCGTTAATGTGACGGAGGAGTTGCTAAAGTTGACGAATAACGTTATTTCGAGGATGATGTTGGGTGAAGCAGAGGAGGCACGTGATGTGGTGCGTGGAGTGACAAAGATCTTCGGGGAGTTTAATGTTTCGGATTTCGTTTGGTTGTTGAGGAAATTTGACCTTCAGGGTTTTGGGAAGAGGATAGAGGATTTGTTTGAGAGGTTGGATACGATGGTGGAAAGGATTATTTGCAAACGAGAGGAAATGAGAAGAAGAAGAAAAAGGGTTGAAAATGGAGATTGTGAAGTGAGAGACTTTCTTGATGTTCTACTTGATTGTGTTGAGGATGAAAACAGCCAAGTCAAAATTAACAGGGTTCACGTTAAAGCCCTCATTGTGGATTTTCTGACAGCAGGGACTGATACCACAGCCATCTCAACAGAATATGCATTGGTGGAGCTGATGAAGAACCCTTTGGTGTTAGAAAAAGCTCGAAAAGAGATTGAGAGTGTGGTGGGAAAAAACAAAGTTGTTGAAGAATGTGATTGTGAAAATCTACCTTACCTGAAAGCCATTGTTAAGGAAACATTTCGTCTGCACCCACCAGTGCCTATGGTTAACAGAATATGTGTTGAAGAGTGTAAGATTGAGAATTATGTGATCCCAAAGAACACGCTACTGTTTGTGAATGTTTGGTCAATGGGAAGGAACCCAAAGTATTGGGAGAAGCCGTTAGAGTTTCGTCCGGAACGGTTCATGATGGTGGGTGAAGGAGGAGATTCGAATGGGGTGATGGATGTAATGGGTCAACATTTTGAACTTCTTCCTTTCGGTTGTGGAAGAAGATTGTGTCCTGGGGTATCTTTAGTGATGCAAGAGGTGCCAGCATTGCTTGGAGCTATCATTCAGTGTTTTGATTTTCAGGTGATCGATTCCAAAGGTTTTAAGGTTGATGGTAAAGCGATTGATATGAATGAGAGGCCAGGATTAACGGCTCCAAGGGCTCAGGACTTGCTTTGTCTTCCACTTCAAAGATCCAATATACATCAAACCACTTAA 1545 0.4583 MEPQFLFLSFFLSAPLLYFLLALYFNNHNHHRLPPSPRWRLPILGHMHLLGPLIHQSLHTLALQLGPFFSLHFASLPCIIVSSPHYAKLVLHTYQHAFINRMETIAVKRLTYDSSLAFARYGEYWRFIKKLSMNELLGSRSINNFRHLRQQETRGFLRVLALKAKAGEAVNVTEELLKLTNNVISRMMLGEAEEARDVVRGVTKIFGEFNVSDFVWLLRKFDLQGFGKRIEDLFERLDTMVERIICKREEMRRRRKRVENGDCEVRDFLDVLLDCVEDENSQVKINRVHVKALIVDFLTAGTDTTAISTEYALVELMKNPLVLEKARKEIESVVGKNKVVEECDCENLPYLKAIVKETFRLHPPVPMVNRICVEECKIENYVIPKNTLLFVNVWSMGRNPKYWEKPLEFRPERFMMVGEGGDSNGVMDVMGQHFELLPFGCGRRLCPGVSLVMQEVPALLGAIIQCFDFQVIDSKGFKVDGKAIDMNERPGLTAPRAQDLLCLPLQRSNIHQTT* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0412 514 Pfam Cytochrome P450 34 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 510 - -
Vra5g0412 514 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 8 510 - -
Vra5g0412 514 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 SUPERFAMILY Cytochrome P450 34 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0412 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0412 Vra-Chr5 4299406 4301194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0412 33 507 Cytochrome P450 AT5G06900 42.593 9.64e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0412 K23179 K24188 vun:114162812 865.529