Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0410 ATGATCATGGGAAACCTTAAACCTGCATGGTTGGAAGCTCTCTATGCTCAAAAGTTCTTTGTGGGCTGCTCTTATCATGAGAATGCAAAGAAGAATGACAAGAACATATGCTGCTTAGACTGTTGCACCAGTATTTGTCCCCACTGCTTACCCTCCCATCGCTTCCATAGCCTTCTGCAGGTTCGCCGTTATGTATATCATGATGTTGTCAGATTGGAAGATCTTCACAAACTCATAGATTGCTCCAACGTCCAGCCTTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCACAAAACCGGCAATTCAAGGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTTATCCATTGCTCTCTGGGATGCAAGGTGGATTTTGTGTTGAAACACTACAAGGACCTCTCTTCCTATTTGAGAACATGCAAGTCACTGCAACTAAGCTCTGATTTTCTGATCCCACAAGAGATGATGGGTGATGATGAAATGACTGGTTCAACCATTGTGGATTGTGATGAGCCAATGAGTTCATGTTCAGGGTCAGAGAACATGAGCATGGCTTGCACAGAGATTGTTAGAAAGAAGCGTAGTGGGTGGAATGTGTGTGCAAGATCAATGAACAACAAGGTTTCCCATGAAGACATGGCCAGTGGCATGAGTAGAAGGAAAGGCATTCCTCATAGATCTCCTTTGTGTTAG 723 0.4398 MIMGNLKPAWLEALYAQKFFVGCSYHENAKKNDKNICCLDCCTSICPHCLPSHRFHSLLQVRRYVYHDVVRLEDLHKLIDCSNVQPYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSSYLRTCKSLQLSSDFLIPQEMMGDDEMTGSTIVDCDEPMSSCSGSENMSMACTEIVRKKRSGWNVCARSMNNKVSHEDMASGMSRRKGIPHRSPLC* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0410 240 Pfam PLATZ transcription factor 62 133 IPR006734 -
Vra5g0410 240 MobiDBLite consensus disorder prediction 221 240 - -
Vra5g0410 240 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 240 - -
Vra5g0410 240 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0410 Vra-Chr5 4272558 4274409 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra5g0410 PLATZ 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0410 - - gmx:100810461 456.062