Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0364 ATGGGGAACATTTATCTGGCACATTTGATGGTGATGGTGGTGGTGGTGGTTTTCCTGGGGGTGTTTTTACCTTGTTTGTGTCAAGGTGATTCAGACTATGACACCACTGCTGTGTACGTTGTTACCCTTAGACATGCTCCTGTTTCTCATTACTATGGTGAGTTGAGAAGAGAAGTTAATAGCTTCAAAGATGCTGCTCCTGCTCCGGGGAGAACCCAATTTAACAAACCAAGAAGGTATGACAATATTACCAAGACAGATAAGAGATATGGCTCTTACATTTCCCAAGTTCATGATTCTCTGTTGAAGAAAGTGTTAAACGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTGATAAATGGATTCGCTGTGCTGGTTACCCAGAAACAGGCAGAGAAACTATCAAGGAGCAATGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGGACTGCGACTACACACACGCCACAGTTTTTGGGTCTGCCACAGGGAGCATGGTTTCAAGAGGGAGGGTTTGAAACTGCTGGAGAAGGTGTTGTTATTGGGTTTGTTGACACTGGCATAGATCCAACACATCCTAGTTTTGGTGATAGTAATTCCAATCATCCATATCCTGTTCCTGGTCATTTTTCTGGCATCTGTGAGGTTACTCGCGACTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGGGCCCGCCACTTTGCTGCTTCAGCCATAACCAGAGGAATATTTAATTCAACTCAGGACTATGCTTCTCCCTTTGATGGTGATGGTCATGGCACGCATACAGCAGCTGTTGCAGCAGGAAACCATGGGATTCCAGTCATTGTTGCTGGACATCACTTTGGAAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCAATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCCTGTCAATTACTCCTAATAGACGTCCTCCTGGTGTGGCAACTTTCTTCAATCCAATAGACATGGCTCTGCTGTCGGCTGTGAAGGCCGGTATTTTTGTTGTGCAAGCAGCAGGAAATACTGGACCATCACCAACAAGCATGTTCTCCTTCAGTCCATGGATCTTTACCGTTGGTGCTGCCTCTCATGATCGGGTTTATAGCAACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGCTGGTCTTGCTCCTGGCACAGATGAAAGCAAACTTTATAAACTGATTCATGCACATCATGCATTGAGCAATGACACAACGGTTGCTGATGATATGTATGTTGGTGAGTGCCAAGATGCAAATAAATTCAACAAGGATTTGATCAAGGGGAACCTCTTAATGTGCAGCTATTCAATTCGATTTGTGCTGGGACTCTCCACCATCAAAAGAGCCTCAGAAACAGCAAAAAATCTTAGTGCAGCTGGTGTTGTCTTCTATATGGATCCCTATGTGATTGGTTTTCAGCTTAACCCTGTTGCAATGAAAATGCCAAGCATAATAATTGCTTCAACTAATGATTCCAAGATTTTAATGCAATACTACAATTCTTCATTGGAAATAGATGCAGTTTCAAAGAAAATTGTTAAATTTGGGGCTGTTGCCAGTATTTGTGGTGGACTTAAAGCGAACTATGGCAGTGCTGCACCCAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAAGACAGTCTTCCTCATGAAGCAGACATTTTGAAACCCAACTTGTTAGCTCCTGGAAGTTTTATATGGGCTGCTTGGAGTTCTGTTGCCGCTGATTCCGTTGAATTCCTAGCAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCTCCTCATGTTGCTGGTCTTGCTGCACTAATTAAGCAAAAGTTCCCGAGTTTTAGTCCTGCAGCCATTGGATCTGCACTTTCCACTACAGCTTCTCTGTATGACAAGAGTGGTGGGCCAATAATGGCTCAACGATCATATGCCTCTCCCGAACTAAATGAGTCTCCAGCAACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAAGTGGAGCACTGAATCCTGGTTTGATTTTTGATTCCGGTTATGATGATTATATGTCATTTCTATGTGGCATCAATGGTTCAGCTCCTGTGGTGCTAAACTACACTGGTCAAAATTGTGGACTCTACAATTCCACTGTGTATGGTCCTGATCTGAACCTGCCCTCAATCACTATATCAAAGCTGAACCAATCTAGAATAGTGCAGAGGACAGTTCAAAACACTGCTCAAAATGAATCATACAGTGTTGGTTGGACTGCTCCTTATGGAGTTTCATTGAAAGTGTTTCCAACTCACTTCAGTATTGGCAGTGGTGAGAAGCAGATATTGTCTGTGCTCTTGAATGCAACAGTTAACAGCTCTGTTTCCAGCTTTGGGAGAATTGGGCTGTTTGGGAATCAAGGTCATGTGCTAAACATTCCAATTTCAATCATGGTTAAAATCTCATCTAACACCACTACAAGTTAA 2562 0.4317 MGNIYLAHLMVMVVVVVFLGVFLPCLCQGDSDYDTTAVYVVTLRHAPVSHYYGELRREVNSFKDAAPAPGRTQFNKPRRYDNITKTDKRYGSYISQVHDSLLKKVLNGEKYLKLYSYHYLINGFAVLVTQKQAEKLSRSNEVSNVVLDFSVRTATTHTPQFLGLPQGAWFQEGGFETAGEGVVIGFVDTGIDPTHPSFGDSNSNHPYPVPGHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTAAVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPTSMFSFSPWIFTVGAASHDRVYSNSIFLGNNVTIPGAGLAPGTDESKLYKLIHAHHALSNDTTVADDMYVGECQDANKFNKDLIKGNLLMCSYSIRFVLGLSTIKRASETAKNLSAAGVVFYMDPYVIGFQLNPVAMKMPSIIIASTNDSKILMQYYNSSLEIDAVSKKIVKFGAVASICGGLKANYGSAAPKVMYYSARGPDPEDSLPHEADILKPNLLAPGSFIWAAWSSVAADSVEFLAGENFALMSGTSMAAPHVAGLAALIKQKFPSFSPAAIGSALSTTASLYDKSGGPIMAQRSYASPELNESPATPFDMGSGFVNASGALNPGLIFDSGYDDYMSFLCGINGSAPVVLNYTGQNCGLYNSTVYGPDLNLPSITISKLNQSRIVQRTVQNTAQNESYSVGWTAPYGVSLKVFPTHFSIGSGEKQILSVLLNATVNSSVSSFGRIGLFGNQGHVLNIPISIMVKISSNTTTS* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0364 853 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 152 IPR037045 -
Vra5g0364 853 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 23 846 - -
Vra5g0364 853 Gene3D - 720 845 - -
Vra5g0364 853 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 846 IPR045051 -
Vra5g0364 853 Pfam Subtilase family 179 665 IPR000209 GO:0006508|GO:0008236
Vra5g0364 853 Pfam Fibronectin type-III domain 749 842 IPR041469 -
Vra5g0364 853 CDD PA_subtilisin_like 403 535 - -
Vra5g0364 853 ProSitePatterns Serine proteases, subtilase family, serine active site. 626 636 IPR023828 -
Vra5g0364 853 CDD Peptidases_S8_3 154 662 IPR034197 -
Vra5g0364 853 Pfam Peptidase inhibitor I9 38 154 IPR010259 -
Vra5g0364 853 SUPERFAMILY Subtilisin-like 154 707 IPR036852 GO:0004252|GO:0006508
Vra5g0364 853 ProSiteProfiles Serine proteases, subtilase domain profile. 159 703 - -
Vra5g0364 853 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 184 195 IPR023827 -
Vra5g0364 853 PRINTS Subtilisin serine protease family (S8) signature 179 198 IPR015500 -
Vra5g0364 853 PRINTS Subtilisin serine protease family (S8) signature 259 272 IPR015500 -
Vra5g0364 853 PRINTS Subtilisin serine protease family (S8) signature 625 641 IPR015500 -
Vra5g0364 853 Gene3D - 394 562 - -
Vra5g0364 853 Gene3D Peptidase S8/S53 domain 181 716 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0364 Vra-Chr5 3735190 3743153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0364 13 848 Subtilisin-like Serine Gene Family AT4G20430 67.929 0.0 1175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0364 - - gmx:100820468 1528.46