Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g0320 | ATGGCAGTGGATATGGTGGATCCTGTTCCAAGAACCAGGATGGAGGAACAATTAGCAATACAAGAAGCTGCTTCCGCTGGTTTGAAAAGCATGGAGCATCTCATTCGCCTCCTTTCTCCCTCTGCCTGCAATTCTTCTTCTTTTTCTTCTAATAACAACAACCTCGACTGCTCCCAAATCACCGACTTCACCGTCTCCAAGTTCAAACAGGTCATTAACCTTCTCAACCGCACCGGCCACGCTCGCTTCCGCCGTGCACCGCCCCAACCCCAACCCCAACCCCAGGCCCCACCGCAACCACTCCCACAACCACAACTTCAACCCCAACCTCAAACCCAACAAGGTTTCACTTTGGATTTTGTTAAACCCACCATTCTCAACTCTAAGCCCTGCAACAAAGACGAAACTCTCACTCTCTCCACAACCACCACCACCTCCTCTTCCTTTTTATCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGTCCTTTCCTCCCTCCCTCCGCCGCCAAACCTCCTCTCTCCTCCTCCCACCGGAAAAAGTGCCGCGATGCCGCGCTCTCCGCCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTGAAACAATCCATCAGAGTCCCGGCGATAAGTTCCAAGATCGCCGACATCCCGCCGGACGAGTACTCGTGGAGGAAGTACGGGCAAAAACCGATCAAGGGTTCACCTTTTCCTCGTGGGTACTACAAGTGCAGCACCGTCAGAGGGTGCCCGGCGAGGAAGCACGTGGAACGCGCCCAAGATGACCCGAAGATGCTGATAGTGACATACGAGGGCGAGCACCGTCACGCGCTGCCGTTGCCGGCCGCTACCGGCGGTGGTTTCGGGCTTTGA | 888 | 0.5563 | MAVDMVDPVPRTRMEEQLAIQEAASAGLKSMEHLIRLLSPSACNSSSFSSNNNNLDCSQITDFTVSKFKQVINLLNRTGHARFRRAPPQPQPQPQAPPQPLPQPQLQPQPQTQQGFTLDFVKPTILNSKPCNKDETLTLSTTTTTSSSFLSSVTNDASVSDGKIGPFLPPSAAKPPLSSSHRKKCRDAALSAKPSCHCSKKRKSRVKQSIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALPLPAATGGGFGL* | 296 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g0320 | 295 | MobiDBLite | consensus disorder prediction | 83 | 112 | - | - | |
Vra5g0320 | 295 | MobiDBLite | consensus disorder prediction | 87 | 107 | - | - | |
Vra5g0320 | 295 | Pfam | WRKY DNA -binding domain | 225 | 281 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0320 | 295 | ProSiteProfiles | WRKY domain profile. | 218 | 284 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0320 | 295 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 10 | 285 | IPR044810 | GO:0003700 | |
Vra5g0320 | 295 | SUPERFAMILY | WRKY DNA-binding domain | 221 | 284 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0320 | 295 | SMART | WRKY_cls | 223 | 283 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0320 | 295 | Pfam | Plant zinc cluster domain | 182 | 221 | IPR018872 | - | |
Vra5g0320 | 295 | Gene3D | WRKY domain | 209 | 285 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra5g0320 | 295 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 10 | 285 | - | - | |
Vra5g0320 | 295 | MobiDBLite | consensus disorder prediction | 165 | 186 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g0320 | Vra-Chr5 | 3081419 | 3083045 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g0320 | 6 | 281 | WRKY Transcription Factor Family | AT2G24570 | 52.090 | 6.51e-92 | 274 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vra5g0320 | WRKY | 2.2e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g0320 | - | - | gmx:100127391 | 416.387 |