Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0261 ATGTCTCCCATGTCAACTGTTCCAATTCATAGACCTGAATTTGGGACCTTATTCTTTAATGGGACTCCAAGCCCTTATAAATGTTTGAGAGTTACCTCCTCATGGACTATGGCCATGGATTCAAAATTTTCTCCGATAAAGAAGAATAGTATTAATAATGATTATAGTATGAAGAATAAGGAAGAACTCTCTATGCAGCTTTCAACTCCACCCATTTCCAAAGTGGAAACTTCAAACTCCAACGATCTCCAATTTGATCGGTTGCAGCCATCGGATCAAGAATTGGGTCGAGTAAATAGGTTTGAGTTTGGGCAATTTGTTGCACGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCATGGTTGAGAGCAGAAAGTCACTGGGAGAATCGATCATATGAAAGATATGTTGATAACTACAAAAGGAAATTTGCTGAGCAGGAATTTCATGCATTAAAGAGACGGTGCAAGGTGCAAAACGGTGATAGCTGCGCATGCATCATCACGGTGAGGAAGGAGCAGAAAAATGCAAAACACTCAATATTAAAAAGTGTTGTGGGAACCCTTGATTTGAACATCCGATATTTGCTTCAAGGGGAGACTTACCCTGGGGAACGGGTAAAGGCTCCCATTTTTTGCTGCATCAACAGAACACCACCAAACAGATATGGATACATTGCAAACCTGTGCGTTATCAAATCAGCTCGGCGCCAGGGGATTGCAAGCAACATGTTGTCTTTTGCTATTGGAGCTGCAAAATCTAACGCAGGTGTGACACAGGTGTATGTGCATGTGGACAAAAATAATAGTCCTGCACAAATATTATACCAAAAGATGGGTTTTGAGATGGTTGAAATGGCAAACTCCCAGTTGGTGGAACAAACATACTTACTGCGATTACAGACATAA 912 0.4123 MSPMSTVPIHRPEFGTLFFNGTPSPYKCLRVTSSWTMAMDSKFSPIKKNSINNDYSMKNKEELSMQLSTPPISKVETSNSNDLQFDRLQPSDQELGRVNRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRSYERYVDNYKRKFAEQEFHALKRRCKVQNGDSCACIITVRKEQKNAKHSILKSVVGTLDLNIRYLLQGETYPGERVKAPIFCCINRTPPNRYGYIANLCVIKSARRQGIASNMLSFAIGAAKSNAGVTQVYVHVDKNNSPAQILYQKMGFEMVEMANSQLVEQTYLLRLQT* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0261 303 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 303 - -
Vra5g0261 303 Pfam Acetyltransferase (GNAT) family 158 282 IPR000182 GO:0016407
Vra5g0261 303 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 169 303 IPR000182 GO:0016407
Vra5g0261 303 Gene3D - 108 303 - -
Vra5g0261 303 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 213 286 IPR016181 -
Vra5g0261 303 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 303 - -
Vra5g0261 303 CDD NAT_SF 213 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0261 Vra-Chr5 2410678 2413684 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra5g0261 Acetyltransf_1 3e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0261 - - gmx:100795426 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0261 5 2410678 2413684 Vra5g0261 5 2410678 2413684 ECH
Vra7g2620 7 46444737 46446657 Vra5g0261 5 2410678 2413684 PCT