Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0256 ATGGGTGCCCTTTTCACCTTCGTTTTCTCGCTCTTGCTTATGGCACAATGCTGCTGGTGTCTAACATCGCCCAAGAAGACATACATTGTTCACATGAAACACAACAACAAGCCTTCAATCTACCCCACTCACACCGACTGGTACACCGCAAATCTTCAATCTTTAACCACTCATTCCGATCCCTTGCTTTACTCTTATACTCATGCCTACAACGGCTTTGCGGCGTCGCTGGCCGAGGACCAGGCGCAGGACCTTCTCAGATCCCAGGATGTTCTTGGAGTCTACGAGGACACGGTCTACCAACTGCACACCACGCGTACGCCCCAGTTTTTGGGGCTCGAGAGAGAGACGGGGCTGTGGGAGGGTCACACCGCGCAGGACCTCAACCAAGCGTCGCACGATGTTATCGTAGGTGTGCTCGACACAGGAGTGTGGCCTGAATCTCCAAGCTTTACTGACGCCGGTATGCCTGAGATTCCGGCTCGGTGGCGAGGGGAGTGCGAGACCGGGCCAGATTTCTCGCCGAGTTTGTGCAACAAGAAACTCATCGGCGCGAGAAGCTTCTCGCGAGGGTTCCACATGGCCTCTGGGGTTGGGTCCAGGGAGAAGGAGCCGGCGTCGGCGCGCGACAGGGACGGGCACGGTACCCACACCGCGAGTACAGCGGCTGGGTCGCACGTGGGGAACGCGAGCCTCCTTGGGTACGCCAGTGGGACCGCACGTGGGATGGCACCGACGGCGCGTGTAGCGGTTTACAAAGTCTGCTGGACCGACGGCTGCTTTGCGTCAGACATTCTCGCCGGGATGGACCACGCCATCCAGGACGGCGTCGACGTGCTCTCGCTCTCCCTCGGCGGCGGCTCCGCGCCGTACTTTCGCGACACCATTGCTGTAGGCGCGTTCGCAGCGGTGGCAAGGGGGATCTTCGTCTCCTGCTCCGCCGGGAACAGCGGCCCCGAGAAGGCCTCACTTGCAAATGTTGCACCCTGGATAATGACCGTCGGTGCTGGGACTTTGGACCGTGATTTCCCCGCCTTCGCCGTTCTCGGCAACAAAAAACGGTACTCCGGTGTTTCGCTTTACAGCGGAACCGGAATGGGGACCAAACCGGTGGGGTTGGTTTATAATAAAGGGTTGAACCAGTCCGGAAGCGTCTGCATGCCCGGTTCACTCGACCCGAGTTTGGTTCGTGGGAAGGTGGTGGTTTGCGATAGAGGGATTAACGCGCGCGTGGAGAAGGGCAAGGTGGTGCGTGACGCAGGTGGGGTGGGGATGATTCTGGCGAACACAGAAGCGAGTGGGGAGGAGTTAGTAGCGGACAGCCACCTTCTACCGGCTGTGGCGGTGGGGAGAATCGTGGGGGATCAGATCAGGAAATACGCTTCCTCAGATCCTAATCCAACGGCAGTTCTCGGTTTCCGAGGAACGGTTTTGAACGTTAGACCTTCACCAGTGGTGGCAGCGTTTAGTTCAAGAGGGCCCAACATGGTGACCCGACAGATTCTGAAACCGGATGTTATTGGGCCTGGGGTTAACATCTTAGCCGGGTGGTCCGAAGCTATTGGGCCCTCCGGGTTGACGGATGACACGCGGAAGACGCAGTTCAACATCATGTCAGGTACGTCGATGTCTTGTCCACACATAAGCGGGTTGGCTGCATTGCTGAAAGCGGCGCATCCAGAATGGAGTCCCAGCGCGATAAAATCTGCACTCATGACCACAGCATACGTTCACGACAACACCAAGTCTCCACTTCGCGATGCCGCAGGTGGTGCATTTTCCACGCCGTGGGCTCACGGTGCGGGCCACGTTAACCCACACAGGGCCCTTTCTCCTGGGCTTGTCTACGACGCCTCCACCAGTGACTACATTAAGTTCCTCTGCTCCTTGGACTACAGCCCCGACCACATTCAACTCATAGTTAAGCGCCACGCCGTTAATTGCACCAGAAAATTCTCTGACCCTGGCCAATTGAACTACCCCTCCTTCTCCATCCTCTTCGGAGCCAAGAGGGTTGTGAGATACACACGCACCCTGACCAACGTGGGCGAGGCTGGCTCCATTTACGATGTCACCGTTGACGCCCCCTCGACGGTGGAGGTGAGGGTGAAGCCCACCAGGCTTGTGTTTGGGAAGGTGGGGGAAAGGCGGAGGTACACGGTGACCTTTGTGTCGAAGAAGAGTGGCGGTGATTCCGGGAAGTATGGTTTCGGAAGCATCATGTGGAGCAATGCGCAGCACCAAGTGAGAAGCCCAGTTGCTTTTTCTTGGACTCTCTTGTGA 2283 0.576 MGALFTFVFSLLLMAQCCWCLTSPKKTYIVHMKHNNKPSIYPTHTDWYTANLQSLTTHSDPLLYSYTHAYNGFAASLAEDQAQDLLRSQDVLGVYEDTVYQLHTTRTPQFLGLERETGLWEGHTAQDLNQASHDVIVGVLDTGVWPESPSFTDAGMPEIPARWRGECETGPDFSPSLCNKKLIGARSFSRGFHMASGVGSREKEPASARDRDGHGTHTASTAAGSHVGNASLLGYASGTARGMAPTARVAVYKVCWTDGCFASDILAGMDHAIQDGVDVLSLSLGGGSAPYFRDTIAVGAFAAVARGIFVSCSAGNSGPEKASLANVAPWIMTVGAGTLDRDFPAFAVLGNKKRYSGVSLYSGTGMGTKPVGLVYNKGLNQSGSVCMPGSLDPSLVRGKVVVCDRGINARVEKGKVVRDAGGVGMILANTEASGEELVADSHLLPAVAVGRIVGDQIRKYASSDPNPTAVLGFRGTVLNVRPSPVVAAFSSRGPNMVTRQILKPDVIGPGVNILAGWSEAIGPSGLTDDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYVHDNTKSPLRDAAGGAFSTPWAHGAGHVNPHRALSPGLVYDASTSDYIKFLCSLDYSPDHIQLIVKRHAVNCTRKFSDPGQLNYPSFSILFGAKRVVRYTRTLTNVGEAGSIYDVTVDAPSTVEVRVKPTRLVFGKVGERRRYTVTFVSKKSGGDSGKYGFGSIMWSNAQHQVRSPVAFSWTLL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0256 760 CDD Peptidases_S8_3 100 576 IPR034197 -
Vra5g0256 760 Pfam Subtilase family 133 579 IPR000209 GO:0006508|GO:0008236
Vra5g0256 760 Pfam Peptidase inhibitor I9 27 103 IPR010259 -
Vra5g0256 760 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vra5g0256 760 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vra5g0256 760 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Vra5g0256 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 103 IPR037045 -
Vra5g0256 760 SUPERFAMILY Subtilisin-like 102 614 IPR036852 GO:0004252|GO:0006508
Vra5g0256 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 757 IPR045051 -
Vra5g0256 760 PANTHER CUCUMISIN-RELATED 17 757 - -
Vra5g0256 760 Gene3D - 340 478 - -
Vra5g0256 760 CDD PA_subtilisin_like 348 469 - -
Vra5g0256 760 Pfam Fibronectin type-III domain 657 754 IPR041469 -
Vra5g0256 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Vra5g0256 760 SUPERFAMILY Protease propeptides/inhibitors 25 101 - -
Vra5g0256 760 MobiDBLite consensus disorder prediction 195 223 - -
Vra5g0256 760 ProSiteProfiles Serine proteases, subtilase domain profile. 110 610 - -
Vra5g0256 760 Gene3D - 627 757 - -
Vra5g0256 760 Pfam PA domain 394 457 IPR003137 -
Vra5g0256 760 Gene3D Peptidase S8/S53 domain 134 623 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0256 Vra-Chr5 2336560 2339413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0256 22 757 Subtilisin-like Serine Gene Family AT2G05920 69.919 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0256 - - gmx:100797543 1325.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0256 5 2336560 2339413 Vra5g0256 5 2336560 2339413 ECH
Vra7g2628 7 46529457 46533134 Vra5g0256 5 2336560 2339413 PCT