Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0232 ATGCAACTCCAAATCTCACTCTCAATGCTTCTACTCTCCTTTTTCTTAACATCTCCCATGCTTTTCACCACCGCAGCACAGAGCAAGCCGCAGGATCTACTCCGATCCTCCTGCATCCACTCACGCTACCCGCGTCTGTGCCTGCGAACCCTCTCGCACTACCCGGGGCCTGCCAACACGCCCCTGGACATGGCTCGAGCCGCGCTCAGGGTCAGCCTGGCCCACACTCGCCGGACCTCCAAGTTCCTGCACACGCTGTCTAAAGGCGGCGCAGCTGCGATGAGCAAGCGGCAGCGCTTCGCTCTCCGCGACTGCACAGAGCAGATCTCGGACTCCGTGGACCAGCTCCGGCGGAGCCTCGACGAGCTTCAGCACCTACGCGCAGAGACCTTCCGCTGGCAAATGAGCAACGCACAGACGTGGGTGAGCGCCGCCCTCACCGACGGCGACACGTGCCTCGACGGCTTCGCCGGCAATGCCAGGCCCGACGTCAATCGCAGAGTCACCGACGTTGCCAGGGTCACCAGCAATGCTCTGTATATGATAAATAGGCTTGGTCAAAGTAGGACCGGAAAGTCGAAGCCCAAGGCCAGGCCCAGGCCCAAGCACAGGCCTGATTCTCTGAAAGAATTGAATTGA 639 0.6041 MQLQISLSMLLLSFFLTSPMLFTTAAQSKPQDLLRSSCIHSRYPRLCLRTLSHYPGPANTPLDMARAALRVSLAHTRRTSKFLHTLSKGGAAAMSKRQRFALRDCTEQISDSVDQLRRSLDELQHLRAETFRWQMSNAQTWVSAALTDGDTCLDGFAGNARPDVNRRVTDVARVTSNALYMINRLGQSRTGKSKPKARPRPKHRPDSLKELN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0232 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 186 IPR035513 -
Vra5g0232 212 Pfam Plant invertase/pectin methylesterase inhibitor 33 180 IPR006501 GO:0004857
Vra5g0232 212 SMART PMEI_2 29 181 IPR006501 GO:0004857
Vra5g0232 212 Coils Coil 106 126 - -
Vra5g0232 212 PANTHER PECTINESTERASE INHIBITOR 3 8 190 - -
Vra5g0232 212 CDD PMEI-like_3 36 185 - -
Vra5g0232 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 190 - -
Vra5g0232 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
Vra5g0232 212 MobiDBLite consensus disorder prediction 184 212 - -
Vra5g0232 212 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0232 Vra-Chr5 2044016 2045122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0232 33 212 Carbohydrate Esterase AT3G14310 30.928 3.67e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0232 - - gmx:100816686 322.783