Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0207 ATGGCTTCAACTGAGTTTGGTGAAGACGGCGATAGCAGAGGCGGTATGTGGGTTTTGGAACAGAGGATTGACCAGCCGATGGATGAAGAAGCTGAAAAGCTCAAAAACATGTACAGAGAAAAAAAATTTTCTACACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGAGTAGTGTATGGAGATTTGGGCACTTCCCCTTTATACGTTTTCTATAATACATTTCCTCATGGAATTGACAACCAGGAAGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACTCTGGTGCCTCTGGTCAAATATGTTCTTATTGTATTACGAGCGAATGACAATGGTCAAGGTGGAACATTGGCTCTTTATTCTTTGCTCTGTCGACATGCAAATATTAGAACCATTCCCAACCAGCATCGTACGGATGAAGAGCTAACAACATACAGTCGATCTACCATCCGTGAAAAGTCATTTGCTGCAAAAACCAAGAGATGGTTAGAGGAACAACCTTATATCAAAGATATCATTCTTATTCTGGCCCTTGTTGGTACTTGCATGGTGATTGGAGATGGAATTCTTACCCCAGCTATATCTGTTTTATCTGCGGTTGGTGGCATCAAGGTAAATCACGCAGATTTGAGCAACGAAGTAGTGGTATTGGTTGCTGTTGTGATACTAGTTGGGTTATTCAGCATGCAACATTACGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAGTTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATAGGCATCTTCAACATCTGTAAATATGACAGCAGTGTTCTAAAAGCTTTTTCACCATTGTATATATACCGCTATCTAAAACGAGGAGGTAGAGATGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACTGGGACAGAGGCTCTTTTTGCAGACCTAGCCCACTTTCCAGTCTCTTCTGTACAGATTGCATTTACTCTCCTAGTCTTTCCTTGCCTTCTTTTAGCCTACTCCGGACAAGCTGCATACCTTATGCATAACTTGAATCATTCAAATGATGCGTTTTATCGTTCTATTCCAGATAAAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTTGCAAGCCAGGCTACAATATCCGCAACCTTCTCAATTATCAAGCAAGCCAATGCTCATGGCTGTTTCCCAAGAATAAAAGTTGTACACACATCAAAGAAGTTCCTTGGCCAGATATACATTCCAGACATCAATTGGATCCTTATGATTCTATGCATTGCTGTTACGGCTGGGTTTAAAAATCAGAGTCAAATTGGAAATGCATATGGTACTGCAGTTGTGCTAGTGATGCTGGTTACAACGTTGCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCATTGGATTCTGGTTGTGGTGTTCACTGGCTTATCACTGATAGTGGAATGCACATACTTCTCTGCAGTACTCTTCAAAGTTGACCAAGGTGGATGGGCTCCCCTTGCAATTGCTGGAGCATTTCTTCTGATCATGTATGTATGGCATTACGGCACAGTGAAACGCTACGAGTTTGAAATGCACAGTAAGGTATCAATGGCATGGATTCTTGGACTTGGACCAAGTTTAGGACTTGTTCGTGTCCCAGGAATAGGGCTGGTATACACAGAGCTTGCAAGTGGAGTACCCCACATATTTTCTCACTTCATCACAAACCTACCAGCTATTCATTCTGTTGTTGTTTTTGTATGTGTGAAGTATCTTCCTGTCTACACTGTCCCAGAAGATGAAAGGTTCCTTGTAAAGAGGATTGGACCAAAGAACTTCCACATGTTTCGGTGCGTTGCAAGATACGGATACAAAGATTTGCATAAGAAAGATGAGGACTTTGAGAAAAAGCTTTTCCACAACCTTTTTGTGTTTGTTAAGTTGGAGTCTATGATGGAGGGATGCTCAGATTCAGATGACTACAGTCTATATGAACAGCAAACTGAGAGATCAAGAGAAGGTCTACTAGTGAACAATAATGCAATCACATCATCAACGAATATGGATCCAACAGTTTCTTCTTTGGATTCTATAGTGTCGGTTACTTCACCATCACACTTGAATGCTACTGTTAGATCCTCTGGTCATGTGAGCAACCAAACTGAGGTTGATGAAGTTGAGTTTTTGAACAGTTGCAGAGATGCTGGGGTGGTTCATATACTCGGAAACACAGTTGTGAGGGCTAGCAGGGATTCAAGATTCTACAAGAAAATAGCTGTGGATTATATATATGCATTTCTGAGGAAGATATGCAGAGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGGTTTTCTATGTATAG 2376 0.4116 MASTEFGEDGDSRGGMWVLEQRIDQPMDEEAEKLKNMYREKKFSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGIDNQEDVIGALSLIIYSLTLVPLVKYVLIVLRANDNGQGGTLALYSLLCRHANIRTIPNQHRTDEELTTYSRSTIREKSFAAKTKRWLEEQPYIKDIILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNEVVVLVAVVILVGLFSMQHYGTDRVGWLFAPVVLLWFLLIGGIGIFNICKYDSSVLKAFSPLYIYRYLKRGGRDGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLNHSNDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGAFLLIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHMFRCVARYGYKDLHKKDEDFEKKLFHNLFVFVKLESMMEGCSDSDDYSLYEQQTERSREGLLVNNNAITSSTNMDPTVSSLDSIVSVTSPSHLNATVRSSGHVSNQTEVDEVEFLNSCRDAGVVHILGNTVVRASRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQVFYV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0207 791 Pfam K+ potassium transporter 53 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0207 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 7 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra5g0207 791 PANTHER POTASSIUM TRANSPORTER 7 790 - -
Vra5g0207 791 TIGRFAM kup: potassium uptake protein 51 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0207 Vra-Chr5 1716308 1720819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0207 5 791 Inorganic Solute Cotransporters AT1G31120 76.747 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0207 K03549 - gmx:100796449 1434.85