Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0204 ATGGTGAGAGAGAGAGACATCATGGGCACATACTCATCATCAAGAGGGTGTGGTGGGGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGTTGATGGCTGAGACATTCTTTGGTGCTTGTGGGGTCCACCAGGATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCTCTTCCCACCGTTCTCACCCTCTACTCCAGGTGCGAAGGTATGTTTATCACGACGTGATTCGATTAGATGATCTGGAAAAACTCATTGATTGTTCCAATATTCAGCCCTATACTATAAACAGTGCCAAAGTAATATTCTTAAATCAGAGGCCACAATCAAGGACATGCAAAGGTCCTGCCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGAGCCATTTCATTTCTGTTCTCTATCATGCAAGGTTGATTACATGGTGTACGCGGGTCAAAGCTTGTCAAACATTTTACATCGATTCGATGAATCTGATTTTGCAATATCGCAGTTCGAGGGTTTAAGAGTGGATGGTTCAGAGGTAACTGATGAAGATACCCAAATTGCCCCTAGCTCCTCTTACTCCAACACTGAGGCCACCAGCAATTCCGTAATTTCATGTGAACCTAATAACAACGTGAAGAAGGGCAAGGGCAACACCTTCCTTCCAGGGATCGTCCTTTCTCTTGGCAGTAGAAGAAAGGGTGCCCCTCACAGGGCCCCCCTCTCCTGA 753 0.4688 MVRERDIMGTYSSSRGCGGGDMNEKPAWLERLMAETFFGACGVHQDRRKNEKNVFCLHCCLSICPHCLSSHRSHPLLQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKVDYMVYAGQSLSNILHRFDESDFAISQFEGLRVDGSEVTDEDTQIAPSSSYSNTEATSNSVISCEPNNNVKKGKGNTFLPGIVLSLGSRRKGAPHRAPLS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0204 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 26 250 - -
Vra5g0204 250 MobiDBLite consensus disorder prediction 192 216 - -
Vra5g0204 250 Pfam PLATZ transcription factor 80 151 IPR006734 -
Vra5g0204 250 PANTHER - 26 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0204 Vra-Chr5 1690951 1696118 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra5g0204 PLATZ 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0204 - - gmx:100806558 483.411