Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0178 ATGGGAATACCTTCTTTGCTGTTGCTCTCCTCTTACTTTCTCCTTTCCCTCATTTTCATACTTTTCAGTCTCAAGTTCCTGTTGGGAAGCAGAAGAGTGAGGAATCTGCCACCGGGGCCCAATCCTCTGCCAATAATAGGAAACCTCAACCTCCTCGAACAACCCATTCACCGCTTTTTTCAACGAACTTCCGAGCAGTACGGGAAAATCATCTCCCTCTGGTTCGGTTCCCGTCTCGCCGTCGTAATCTCNTCGCACTCGGCATTCCAAGAATGTTTCACCAAACACGACCTTGCCTTGGCCAACCGCCTTCCCTCTCTCTCCGGAAAATACATTTTCTACGACAACACCACTGTCGGCTCCTGTTCCCATGGTGACCACTGGCGCAACCTCCGCCGCATCACCGCCCTCGACGTTCTCTCCACCCAGCGAGTCCACTCTTTCTCCGGAATCCGAAGCGACGAGACCAGGCGCTTGATTCACAGGCTGGCCAGGAACTCGCGCCAGGGTTTTGCTCGCGTGGAGATAACTTCCATGTTCAACGACTTGACCTACAACAATGTGATGAGGATGATATCTGGGAAGAGGTTTTACGGGGAGGAGACCGACATGAAGAACGTGGAGGAAGCCAGGGAGTTTAGAGAGACCGTGGCGGAGATGCTGCAACTCATGGGCTTGGCTAACAAGGCCGATTACTTGCCTTTCCTGAGGTGGTTCGATTTTCAGAATGTGGAGAAGCGCTTGAAGAGTATCAGCAAGAGGTACGATGCCATCTTGAACAAGATCATCGACGAGAACCGCAGCAACAAGGATAATCGTGAGAATTCCATGATCGGCCATCTCCTGAAACTCCAAGAGACTCAGCCTCAGTATTACACCGATCAGATAATCAAAGGCCTTGCTCTGGCGATGCTATTTGGAGGAACAGACTCGTCGACGGGAACTCTGGAGTGGTCGTTGTCGAATTTGTTGAATAAGGCAGAAGTGATGGAGAAGGCGAGAGAGGAGTTGAAGAGAGTGGTGGGGGAAGATCGGTTGTTGAATGAGACAGACCTTCCAAAACTTGGTTATCTTAGGAAAATAATTCTTGAGACACTTAGGTTGTATCCGCCAGCTCCAGTGCTCATACCACACGTTACTTCGGAGGATATAACTGTGGAAGGATTCAATGTGCCTCGGGACACAGCAGTGATCATCAATGGGTGGGCGATGCATAGAGATCCTGATATGTGGGATGAAGCCACATNCTTTAAACCAGAGAGGTTTGATGTTGAAGGAGAAGAGAAAAAGTTGGTTGCTTTTGGGATGGGAAGAAGGGCTTGCCCAGGAGAAGCCATGGCCATGCAAAGCGTTAGCTATACTTTGGGTTTATTGATTCAATGTTTCGATTGGAAACGAGTGAATGATGAAAAAGTTGATATGAGAGAGAATAATTGGATCACTTTGTCAAGGTTAATTCCTCTTCAAGCCATGTGCAAGACCCGCCCACTCTACGCTCAACTTTCCTCAAATTAG 1515 0.4878 MGIPSLLLLSSYFLLSLIFILFSLKFLLGSRRVRNLPPGPNPLPIIGNLNLLEQPIHRFFQRTSEQYGKIISLWFGSRLAVVISSHSAFQECFTKHDLALANRLPSLSGKYIFYDNTTVGSCSHGDHWRNLRRITALDVLSTQRVHSFSGIRSDETRRLIHRLARNSRQGFARVEITSMFNDLTYNNVMRMISGKRFYGEETDMKNVEEAREFRETVAEMLQLMGLANKADYLPFLRWFDFQNVEKRLKSISKRYDAILNKIIDENRSNKDNRENSMIGHLLKLQETQPQYYTDQIIKGLALAMLFGGTDSSTGTLEWSLSNLLNKAEVMEKAREELKRVVGEDRLLNETDLPKLGYLRKIILETLRLYPPAPVLIPHVTSEDITVEGFNVPRDTAVIINGWAMHRDPDMWDEATXFKPERFDVEGEEKKLVAFGMGRRACPGEAMAMQSVSYTLGLLIQCFDWKRVNDEKVDMRENNWITLSRLIPLQAMCKTRPLYAQLSSN* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0178 504 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 496 - -
Vra5g0178 504 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 SUPERFAMILY Cytochrome P450 37 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 Pfam Cytochrome P450 37 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 Gene3D Cytochrome P450 28 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 Coils Coil 241 261 - -
Vra5g0178 504 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 9 496 - -
Vra5g0178 504 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0178 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vra5g0178 504 Coils Coil 320 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0178 Vra-Chr5 1473917 1475850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0178 13 501 Cytochrome P450 AT4G37340 50.607 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0178 K13260 - gmx:100812102 812.757