Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0177 ATGTCTCTCTTCTTATCTTGCTCGCTTCTTGCTTTGGTCCTAATCGTCACTCTCAAGTTCCTTTTCCAAAGAAGCAGAAAGTTAAGAAACCTTCCACCAGGTCCCAATGCTCTTCCCATAATAGGAAACCTTAACCTCGTCGAACAACCAATCCACCGTTTTTTTCAGCGCATGTCCCAAAAATATGGAAAAATCATTTCCCTCTGGTTCGGCTCTCGGCTCGTGGTTGTTGTTTCCTCACCCTCAGCATACCAAGAATGCTTCACCAAACACGACGTTACCTTGGCCAACCGCGTGCGCTCCCTCTCCGGGCAGTACATCTTCTACGACTGTACCACCGTTGGGTCCTGCTCCCACGGCGAGCACTGGCGTAACCTCCGCCGCATCACTTCCCTCGACGTCCTCTCCACGCAGCGCGTCCACTCCTTCGCCGGAATCCGAAGCGACGAAACCAAGCGCCTGATTCACAGGTTGGCCAGGAACTCCAGTGTGGATTATGCGCACATGGAGATAACTTCCATGTTCAGCGACTTGACCTACAACAACATCATGAGAATGATATCGGGGAAGAGGTTTTACGGGGAGGAGACTGACATGCAGAACGTGGAGGAAGCCCGGGAGTTCAGAGATTGCGTGTCGGAGATGCTCAAACTCATGGGCTTATCTAACAAGGGTGACTACTTGCCTTTCCTGAGGTGGTTCGATTTCCAGAACCTCGAGAAGCGGTTGAAGAACATTAGCGACAGGTACGATACCATCTTGAACAAGATCTTGGATGAGAACCGTAACAGCAAGGATCGTGAGAATTCCATGATCGACCATCTCCTCAAACTGCAAGAGACTCAGCCTGAGTATTACACTGACCAAATCATCAAAGGCCTTGCTTTGGCTATGCTTTTTGGCGGAACAGACTCATCAACTGGAACTTTGGAGTGGGCTTTATCTAATTTGTTGAATCACCCAGAGGTGTTGAAGAAGGCAAGAGAAGAATTGGACGCTATTGTTGGACAAGATAGATTGTTGAATGAATCAGACCTTCCAAAACTTCCTTACCTTAGGAAGATCATTCTTGAGACACTCAGGCTGTATCCCCCAGCTCCAATTCTAATTCCACACGTGGCTTCAGAAGATATCACTGTTGAAGGATACAATGTCCCGAAAGACTCAATAGTGATTGTGAATGGTTGGGCCATGCAGAGAGACCCTGATCATTGGAAGGATGCTACAAGCTTTAAACCTGAGAGGTTTGATGAAGAAGGAGAGGAGAAAAAGTTAGTAGCTTTTGGAATGGGAAGAAGGGCTTGCCCTGGAGAACCCATGGCTATGCAGAGTGTGAGCTACACCATTGGATTGTTGATTCAATGTTTTGACTGGAAACGAGTGAATGATGAAAAGCTTGACATGACAGAGAACAATTGGATCACATTGTCAAGGCTAATTCCACTGGAGGCAATGTGTAAAGCTCGCCCTCTCGCTAAAAGAATTGGAAGCTTTTAA 1497 0.4729 MSLFLSCSLLALVLIVTLKFLFQRSRKLRNLPPGPNALPIIGNLNLVEQPIHRFFQRMSQKYGKIISLWFGSRLVVVVSSPSAYQECFTKHDVTLANRVRSLSGQYIFYDCTTVGSCSHGEHWRNLRRITSLDVLSTQRVHSFAGIRSDETKRLIHRLARNSSVDYAHMEITSMFSDLTYNNIMRMISGKRFYGEETDMQNVEEAREFRDCVSEMLKLMGLSNKGDYLPFLRWFDFQNLEKRLKNISDRYDTILNKILDENRNSKDRENSMIDHLLKLQETQPEYYTDQIIKGLALAMLFGGTDSSTGTLEWALSNLLNHPEVLKKAREELDAIVGQDRLLNESDLPKLPYLRKIILETLRLYPPAPILIPHVASEDITVEGYNVPKDSIVIVNGWAMQRDPDHWKDATSFKPERFDEEGEEKKLVAFGMGRRACPGEPMAMQSVSYTIGLLIQCFDWKRVNDEKLDMTENNWITLSRLIPLEAMCKARPLAKRIGSF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0177 498 Coils Coil 236 256 - -
Vra5g0177 498 SUPERFAMILY Cytochrome P450 32 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 Pfam Cytochrome P450 32 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 4 493 - -
Vra5g0177 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 493 - -
Vra5g0177 498 Gene3D Cytochrome P450 16 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vra5g0177 498 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0177 498 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0177 Vra-Chr5 1454214 1456086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0177 12 495 Cytochrome P450 AT4G37340 51.943 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0177 K13260 - gmx:100801092 885.56