Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0176 ATGACTATCTGTAATCTCCACTCACTGAAACAACAATCCATGGAAACACTTCCCCTGTTACCATACTTTCTCTTCTTCCTCCTTTCTCTTATTATCACTTTCAACCTTTTCTTCCAAAGATCAAACCACAAAAACCTTCCACCAGGTCCACCACCTCTTCCAATAATCGGCAACCTTAACCTCCTCGAACGCCCCCTCCACCGTTTCCTCCAACGCATGTCCCAAACACACGGCCACGTCTTCTCCCTCTGGTTCGGTTCCCGTCTCGCCGTCATCGTTTCATCGCCCTCCGCCTTCCAAGAATGTTTCACCAAAAACGACGTCGCATTGGCCAACCGACCTCGCTCCCTCTCCGGAAAGCACATCTTCTACAACCACACCACCGTGGGGTCCTGCTCCTACGGCGACCACTGGCGCAACCTCCGCCGCATCATCGCACTCGACGTTCTCTCAACTCAACGCATTCACTCCTTTGCGGGAATCCGCAAAGATGAAACGGAGAGGCTGCTGCGTACCCTGGCAAAGGCCTCACGCATGGAGTATGCGCAGGTGGAGCTAGGCTCCATGTTCCATGACATGACGTATAACAACGTGATGAGGATGATATCGGGGAAAAGGTACTACGGGAATGAGATTCAGGTGAAGGATTTGGAAGAGGCGAAGGAGTTCAGAGAGACGGTGGAGGAAATGCTGAAACTGGCGGGAGTTTCCCACAAGGCTGATTATTTGCCCTTCCTTCGGTGGTTCGATTTTCAGAACCTGGAGAAGAAGCTGAAGAGTATTAACAAGAGATTCGATACGTTCTTGGATGCACTCCTTCACGAGCAACGCAACAAGAAGGAGAGAGAGAACACTATGATGGATCATCTTCTGTATCTGCAAGAGTCTCAGCCGGAGTACTATACTGATCAAATCATCAAAGGTCTTGTTTTGGCTATGCTCTTCGCTGGGACAGATTCATCAGCCGTGACTTTGGAGTGGTCACTGTCAAATTTATTGAACCAGCCAGAGGTGTTGAAGAAAGCAAGAGATGAATTGGATAGTAAAGTAGGGAAAGAGCGTTTGGTAAATGAATCAGACCTTCCAAATCTGCCTTACCTTAGAAAGATAATCCTAGAGACACTTAGGTTATACCCTCATGCTCCACTGGCAATACCACATGTTTCCTCGGAAGACATAACCATTGAAGAGTTCAACGTTCCACGAAACACCATAATAATTGCTAATATTTGGGCCATGCAAAGAGACCCTGTATTGTGGGATGAAGCCACATGTTTCAAACCGGAGAGGTTTGATGAAGAGGGATTGGAGAAGAAGTTGGTGTCATTTGGAATGGGAAGAAGGGCTTGTCCAGGAGAAACTTTGGCTATGCAGAATGTTGGGTTGACTTTGGGATTATTAATTCAATGCTTTGACTGGAAGCGAGTAAATGAGGATCAAATTGATATGAGAGAGGCAGATCGGTTCACTTCATCCAGGTTAACTCCATTGAAGGCCATGTGTAAAACCCGCTCACTCATTCACAACCTTAATTTCAAATAA 1542 0.4695 MTICNLHSLKQQSMETLPLLPYFLFFLLSLIITFNLFFQRSNHKNLPPGPPPLPIIGNLNLLERPLHRFLQRMSQTHGHVFSLWFGSRLAVIVSSPSAFQECFTKNDVALANRPRSLSGKHIFYNHTTVGSCSYGDHWRNLRRIIALDVLSTQRIHSFAGIRKDETERLLRTLAKASRMEYAQVELGSMFHDMTYNNVMRMISGKRYYGNEIQVKDLEEAKEFRETVEEMLKLAGVSHKADYLPFLRWFDFQNLEKKLKSINKRFDTFLDALLHEQRNKKERENTMMDHLLYLQESQPEYYTDQIIKGLVLAMLFAGTDSSAVTLEWSLSNLLNQPEVLKKARDELDSKVGKERLVNESDLPNLPYLRKIILETLRLYPHAPLAIPHVSSEDITIEEFNVPRNTIIIANIWAMQRDPVLWDEATCFKPERFDEEGLEKKLVSFGMGRRACPGETLAMQNVGLTLGLLIQCFDWKRVNEDQIDMREADRFTSSRLTPLKAMCKTRSLIHNLNFK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0176 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 509 - -
Vra5g0176 513 Gene3D Cytochrome P450 36 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 Pfam Cytochrome P450 47 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 SUPERFAMILY Cytochrome P450 47 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vra5g0176 513 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g0176 513 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 14 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0176 Vra-Chr5 1442958 1444986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0176 14 510 Cytochrome P450 AT4G37340 51.195 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0176 K13260 - gmx:100798269 822.387